Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., ABC transporter, periplasmic substrate-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  112 bits (280), Expect = 2e-29
 Identities = 98/415 (23%), Positives = 171/415 (41%), Gaps = 38/415 (9%)

Query: 33  AMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAFRAGQAPNILQVFDAG 92
           ++GG + + V  +   F     D  +TPVY G Y ETLT  + A R G+ P++  +    
Sbjct: 39  SVGGPITKIVEGMTEQFMKEHPDINITPVYAGIYRETLTKALTALRGGEPPHVAVLLSTD 98

Query: 93  AATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYADNTGKMVGMPFNSSTPVLYYN 152
             T++    +  P   +M      FT   +   + N  +   GK  G+PF  ST V+Y+N
Sbjct: 99  MYTLIDEDAIV-PYDSIMKPEEMAFTKAFFPGFMSN--SQTGGKTWGIPFQRSTIVMYWN 155

Query: 153 KDMLASVNA---QAPQTYEQLEQVAAKLAEKGQAGFAQSLTPW--IMFENFKSRHNLPLS 207
           K+   +      +AP  +++L  +  KL  K ++G    +T W   +     +   L   
Sbjct: 156 KEAFKAAGLDPDKAPANWQELVAMGKKLTVKDESG---KVTQWGVAIPSTGYAYWMLQAL 212

Query: 208 DKQNGYQDLS---TKIMFNSDDMLMHVKKLKEWSDKGYYKYYGS-DWDANQTPFERGEVA 263
             QNG + ++   TK  F+    +  +  L + + K      G+ DW      F   + A
Sbjct: 213 AIQNGVELMNAEGTKTYFDDPKAIEALTFLVDLAGKHGVSPSGTIDWATTPRDFFERKTA 272

Query: 264 MWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQGHTPAQDKGVA 323
           +   ++G+   +R   +F  G   LP   +   +PT    GG   +  +  TPA+ +   
Sbjct: 273 IMWTTTGNLTNVRKNAQFPFGVGMLPA-NTRPGSPT----GGGNFYIFKKSTPAERQAAV 327

Query: 324 AFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEV-------GVKQLSL 376
            F  ++T  E    W   TGYV V   A++      Y    P A +       GV +LS 
Sbjct: 328 TFVKWMTSAERAAQWGIDTGYVAVRPDAWETKAMKDYVASFPYAAIARDQLAHGVAELST 387

Query: 377 PDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLNRFAR 431
            D +           +V + +        +G  T   +L   + E+ ++L R+A+
Sbjct: 388 HDNQ-----------RVTKALDDAIQAAVTGSKTPAEALKAAQKEAERILRRYAK 431