Pairwise Alignments

Query, 457 a.a., flagellar motor protein MotA from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 2/102 (1%)

Query: 319 YNKEQQRSV--EALELRLLEAVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQ 376
           Y   + RSV  + +E  +   V  E   LE GL +L  + + AP +GL GTV G++ +F 
Sbjct: 161 YQPGEARSVRRDGIERAMRLTVNAELRKLEVGLPLLASVGSAAPFVGLFGTVWGIMHSFT 220

Query: 377 VITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAHNILS 418
            I Q  +    V+A GI+ AL  T  GL+AAIP +LA N LS
Sbjct: 221 SIAQSNDTSLAVVAPGIAEALFATAIGLVAAIPAVLAFNALS 262