Pairwise Alignments

Query, 180 a.a., MotA/TolQ/ExbB proton channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 181 a.a., Biopolymer transport proteins from Pseudomonas stutzeri RCH2

 Score =  147 bits (371), Expect = 1e-40
 Identities = 83/173 (47%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 9   LLDYWQPLDEFMAQGGAVLWWLAVVVLLCWLLVIERLLFLSVTFPKQRQHWVD----LWL 64
           L+D    L +FM  GG V+W LA + +L W LV ERL F+   FP    HWV+     W 
Sbjct: 11  LVDSGHALLDFMTAGGVVMWALAGLCVLYWTLVFERLWFMRRVFP----HWVESRRQAWA 66

Query: 65  QRADQHSWFARSIREQWLGEAHNALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMAT 124
           Q AD+   + R++R  WL +A   L+  L L K LVA+ P+LGLLGTV+GMI+VFDV+A 
Sbjct: 67  QMADEPGSWQRAVRSAWLAQAQQQLSGPLRLSKTLVAMYPLLGLLGTVSGMIAVFDVLAL 126

Query: 125 QGSSDPKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQALR 177
            GS +P+ MA+G+  ATLPTMAGMV A+ GLF  ARL +  R    +L   LR
Sbjct: 127 SGSGNPRGMAAGVWQATLPTMAGMVLAITGLFSLARLERIARQSLDRLADQLR 179