Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 143 a.a., Biopolymer transport protein ExbD/TolR from Pseudomonas syringae pv. syringae B728a

 Score = 55.1 bits (131), Expect = 4e-13
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)

Query: 5   RRTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPTAAHAVSQKQAG---I 61
           RR   +E   I+L S++D+VFI+L+FFIVT++F RE+ + V+ P A        A    +
Sbjct: 4   RRRRPRENIDINLVSLIDVVFILLLFFIVTTTFTRETQLRVDLPQAVTGTPDVDASAKQL 63

Query: 62  FVAITAANDIYIDKRQVDVERVQATLEHLLLD---QPDASLVIQADEHAFNGTVVKVMDA 118
            +AI A     ++ + +    +   +E L  +        L I AD    + +V+  MDA
Sbjct: 64  DIAINADGIFSLNNQLLPKNDLATLIEALQRESGGDTSLPLSISADGKTPHQSVITAMDA 123

Query: 119 AKGAGVKSIAL 129
           A   G   + +
Sbjct: 124 AGKLGFSHLRM 134