Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 145 a.a., tolR protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.9 bits (128), Expect = 9e-13
 Identities = 36/139 (25%), Positives = 75/139 (53%), Gaps = 10/139 (7%)

Query: 5   RRTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPTA-AHAVS-QKQAGIF 62
           +R  ++  A+I++   +D++ ++LI F+ T+  V + GV+V+ PT  A A+S   +  + 
Sbjct: 5   QRKRRRPVAEINVVPYIDVMLVLLIIFMATAPIVTQ-GVKVDLPTGEAEALSTDSKPPVV 63

Query: 63  VAITAANDIYID-------KRQVDVERVQATLEHLLLDQPDASLVIQADEHAFNGTVVKV 115
            +I A  D Y+D       K  + ++ V   +  +++ +P+  +V++AD       V+++
Sbjct: 64  ASIDANGDYYLDIGSGSSAKDVLTLDDVATQVAAMIMLEPERPVVVKADRTIPYEDVIQL 123

Query: 116 MDAAKGAGVKSIALAAEKP 134
           M   + AGV S+ L  + P
Sbjct: 124 MITLQKAGVPSVGLMTDSP 142