Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., biopolymer transport protein ExbD/TolR (RefSeq) from Shewanella loihica PV-4

 Score = 56.6 bits (135), Expect = 1e-13
 Identities = 35/138 (25%), Positives = 73/138 (52%), Gaps = 9/138 (6%)

Query: 5   RRTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPT--AAHAVSQKQAGIF 62
           +R  ++  A+I++   +D++ ++LI F+VT+  V + GV+V+ P   A    +  +  + 
Sbjct: 6   QRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQ-GVKVDLPQGEAESLPADSKPPVV 64

Query: 63  VAITAANDIYID------KRQVDVERVQATLEHLLLDQPDASLVIQADEHAFNGTVVKVM 116
            +I A  D Y+D      K  +D+E +   +  ++  +P+  +V++AD       V+++M
Sbjct: 65  ASIDADGDYYLDIGSASSKEVLDLEEIAVRVSAIVQLEPERPVVVKADRSIPYERVIQLM 124

Query: 117 DAAKGAGVKSIALAAEKP 134
              + AGV S+ L  + P
Sbjct: 125 VTLQKAGVPSVGLMTDSP 142