Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., tolr protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 2e-12
 Identities = 33/142 (23%), Positives = 77/142 (54%), Gaps = 9/142 (6%)

Query: 1   MRLG-RRTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPTAAHAV--SQK 57
           M++G +R  ++  A+I++   +D++ ++LI F+VT+  V + GV+V  P  A  V  +  
Sbjct: 1   MQVGYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQ-GVKVELPQGAAEVLPADS 59

Query: 58  QAGIFVAITAANDIYIDK-----RQVDVERVQATLEHLLLDQPDASLVIQADEHAFNGTV 112
           +  +  +I A    ++++      ++++E +   +  +++ +P   +V++AD       V
Sbjct: 60  KPPVVASIDADGAYFLNQGGSNNEEMELEELATAVAAIMVTEPQRPVVVKADRTIPYDNV 119

Query: 113 VKVMDAAKGAGVKSIALAAEKP 134
           +++M   + AGV S+ L  + P
Sbjct: 120 IQLMVTLQQAGVPSVGLMTDSP 141