Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 141 a.a., putative biopolymer transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 52.0 bits (123), Expect = 3e-12
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 8   SKQEEAQIDLTSMLDIVFIMLIFFIV-TSSFVRESGVEVNRPTAAHAVSQK--QAGIFVA 64
           + ++E ++ ++ ++D VF++LIFF+V T + V+   + V+ PT+  A+  K       V 
Sbjct: 7   NNEDEPEVSMSPLIDCVFLLLIFFLVSTMTKVKNRDISVDLPTSESAIKLKPDDKQAIVG 66

Query: 65  ITAANDIYIDKRQVDVERVQATLEHLLLDQPDASLVIQADEHAFNGTVVKVMDAAKGAGV 124
           + A  + Y D +      +   L    +  P   + I  D++   G  V+VMDA +   +
Sbjct: 67  LDAEGNFYWDGQPCSTNFMMEQLRETCISDPGRRIRIDMDKNTPFGRFVEVMDACQFYNL 126

Query: 125 KSIAL 129
            +I +
Sbjct: 127 TNIGI 131