Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., biopolymer transport protein ExbD/TolR (RefSeq) from Shewanella sp. ANA-3

 Score = 53.5 bits (127), Expect = 1e-12
 Identities = 32/142 (22%), Positives = 79/142 (55%), Gaps = 9/142 (6%)

Query: 1   MRLG-RRTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPTAAHAV--SQK 57
           M++G +R  ++  A+I++   +D++ ++LI F+VT+  V + GV+V  P  A  V  +  
Sbjct: 1   MQVGYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQ-GVKVELPQGAAEVLPADS 59

Query: 58  QAGIFVAITAANDIYIDK-----RQVDVERVQATLEHLLLDQPDASLVIQADEHAFNGTV 112
           +  +  +I A    ++++      +++++ +   +  +++ +P+  +V++AD +     V
Sbjct: 60  KPPVVASIDADGAYFLNQGGSNNEEMELDELATAVAAIMVTEPERPVVVKADRNIPYDNV 119

Query: 113 VKVMDAAKGAGVKSIALAAEKP 134
           +++M   + AGV S+ L  + P
Sbjct: 120 IQLMVTLQQAGVPSVGLMTDSP 141