Pairwise Alignments

Query, 392 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., TPR domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (274), Expect = 1e-28
 Identities = 101/366 (27%), Positives = 172/366 (46%), Gaps = 16/366 (4%)

Query: 30  KVVKANQLAQENKVKEAIQILKQAELSRSYDRAYVARMLGVFYWQNEQIPAAIASLKLAV 89
           KV K+ +     +V EAI IL +A     +D+AYVARMLG FY +  ++  AI  +K AV
Sbjct: 47  KVQKSFEAYTNGQVDEAIAILLEANAKGDFDKAYVARMLGNFYAEKGKMDTAIKYMKQAV 106

Query: 90  ESNELQDDQAWTTRKMLADLLISQQEYRSALKHYYT-LAQAIPADQKGNELWLRISQLHF 148
           E++ L       + K+ ADLLI +++++ A+  YY  +  A   D     ++ RI   + 
Sbjct: 107 EADVLGGTDHAASMKLYADLLIQEKKWKEAIAVYYKWMDFACKTDDP--VVYRRIGIAYS 164

Query: 149 QMQEWKAVLNGMQQYAQFQTKDAVLPLSLQLGAQLNLEQWKPGILTLKRLLVLEPQKTEW 208
           ++++W  VL    Q      +       ++L A    +Q+K  +  L+ ++ L       
Sbjct: 165 ELKQWDKVLEVADQGLSHAKEPDKNLYQMKLTAYFEKKQYKNAVKVLETMVPLFQDDKRL 224

Query: 209 WRQLVSLELRVGQKKEALSTLALA-KMQKVALNQQDLRLLAQLYAQNGIPERAAQVMESL 267
           W QL    L       +L T  L+ +   +  +   L   +QL A  G P RAA +ME  
Sbjct: 225 WIQLAQFYLLTEDFPRSLQTYDLSYRNGFLKEDAGSLVRYSQLLASQGSPYRAATIMEKF 284

Query: 268 DEA---QSNQQLITERAIYWQRAKEWDKAIATWRLAA--TKDAKYHWHVAQLLLQEGHYQ 322
            +A   +SN +   + A ++Q +KE +KA   +  AA   KD K      ++L     Y 
Sbjct: 285 MKAGVIESNAKHYEQLAGFFQNSKEIEKAAEYYGKAAEEKKDGKLFLKQGRMLALAEKYS 344

Query: 323 QALAELDQVKE----RDKQAQVALAKTRALYKLNQFEAALVQAK-RADSLQSSESAKQWI 377
            A+  L++  +       +A   LA      +L Q+++A  +AK  A   ++  SAK +I
Sbjct: 345 AAVPALEKSLDAGIPNPGEAHFELALIH--LQLKQYKSAYSRAKLAAQDKKTERSAKSYI 402

Query: 378 KYLSQQ 383
            Y+ ++
Sbjct: 403 SYIQEK 408