Pairwise Alignments

Query, 392 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., TPR repeat-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  116 bits (290), Expect = 1e-30
 Identities = 101/378 (26%), Positives = 181/378 (47%), Gaps = 24/378 (6%)

Query: 28  ASKVVKANQLAQENKVKEAIQILKQAELSRSYDRAYVARMLGVFYWQNEQIPAAIASLKL 87
           A KV K+ +     ++ EAI +L +A     +D+AYVARMLG FY +  ++  AI  LK 
Sbjct: 46  AKKVQKSFEAYTNGQLDEAIAVLLEANPKNDFDKAYVARMLGNFYAEKGKMDTAIKYLKQ 105

Query: 88  AVESNELQDDQAWTTRKMLADLLISQQEYRSALKHYYT-LAQAIPADQKGNELWLRISQL 146
           AVE++ L       T ++ ADLL+ +++++ A+ +YY  +     AD   ++++ RI   
Sbjct: 106 AVEADILGGTDHAATLRLYADLLLQEKKFKEAIPYYYKWMDFTCKAD---SQMYRRIGIA 162

Query: 147 HFQMQEWKAVLNGMQQYAQFQTKDAVLPLSLQLGAQLNLEQWKPGILTLKRLLVLEPQKT 206
           + ++++W  V+    +              ++L +  N +++K  +  L+ ++ L P   
Sbjct: 163 YTELKQWDKVIEVADKGLSLAEAPDKGLYQMKLTSYFNQKKYKKAVGVLEVMVPLFPDDG 222

Query: 207 EWWRQLVSLELRVGQKKEALSTLALAKMQKVALNQQDLRLLAQLYAQNGIPERAAQVMES 266
             W QL    L V    ++L+T  LA       +  ++  LAQL AQ G P +AA+V + 
Sbjct: 223 RLWVQLAQFYLMVEDYDKSLATYDLAYRNGFLDSGANITRLAQLMAQKGAPYQAAKVFQK 282

Query: 267 LDEAQSNQQLITERAI-------YWQRAKEWDKAIATWRLAA--TKDAKYHWHVAQLLLQ 317
                    LITE A        ++Q AKE+ +A   +  AA    D K +    +LL  
Sbjct: 283 ----NMKSGLITEDAKSYEILAGFYQNAKEFKEAAEFYGKAAAINNDGKLYLKQGRLLSL 338

Query: 318 EGHYQQALAELDQV----KERDKQAQVALAKTRALYKLNQFEAALVQA-KRADSLQSSES 372
              Y +A+  L++      E   +A   LA   A   L Q+++A  +A   A   ++ +S
Sbjct: 339 NEKYSEAIPVLEKAISLGIEHPGEANFELA--LAHLSLKQYKSAYNRAVLAAKDKKTEKS 396

Query: 373 AKQWIKYLSQQRQTQSTQ 390
           A  +I Y+ ++ +  + +
Sbjct: 397 ANSYIAYIKEKARMHNVE 414