Pairwise Alignments

Query, 282 a.a., DNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., DNA ligase, ATP-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  216 bits (551), Expect = 4e-61
 Identities = 105/269 (39%), Positives = 165/269 (61%), Gaps = 3/269 (1%)

Query: 13  MLAQQTLANDGPLAFIPITYA--NNYQHGIDIFDYWKSEKLDGIRAIWTGKQLVTRNGNP 70
           +L   + A+  P   +   Y+  N+  +   I  ++ SEKLDG+R  W G++L TR GNP
Sbjct: 35  VLITASFASPAPNIQLATEYSLDNHSNNDAQISTFFVSEKLDGVRGYWDGQRLFTRQGNP 94

Query: 71  IAAPAWFTESLPSYSLEGELWAGRGNFSLVQQTVLDSQPADSAWRKISLMLFDMPDAAGD 130
           I AP+WFT   P+ +++GELW GRG F  +   +  + P D+ W+ +  M+FD+P   G 
Sbjct: 95  ILAPSWFTAEFPAIAMDGELWLGRGQFEAISGLIRQASPKDADWQNVRFMVFDLPTTKGS 154

Query: 131 YSKRYYNLIHLVNSLDLKHIRYVEHTPIKSEAELLSYLDNISEKSGEGVMLRKISARYQA 190
           + +RY+ +  L+    + +++ +E   + S   L   LD +     EG++L + +A Y  
Sbjct: 155 FEERYHKMQALIAGKSV-YLQVIEQFSVASVEALYQTLDTLVALGAEGLILHRRTAIYTP 213

Query: 191 GRSNDLLKLKRHQDAEATVIGYRLGMGKYKGKMGSMLVRTAEGLEFYIGSGFSDVERAEP 250
           GR+ +++KLK + DAEATVIGY  G G++ GKMG++ V+T +G  F IG+GF+  ER  P
Sbjct: 214 GRNPNVMKLKPYLDAEATVIGYIAGKGQFSGKMGALRVQTPDGRIFNIGTGFNLAERQHP 273

Query: 251 PKIGSVITYRYNGLTTEGKPRFARFVRVR 279
           P IG++ITY+Y GLT  G PRFA ++R+R
Sbjct: 274 PAIGTLITYKYLGLTVNGLPRFASYLRIR 302