Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., putative efflux protein, MATE family from Pseudomonas stutzeri RCH2

 Score =  375 bits (962), Expect = e-108
 Identities = 194/440 (44%), Positives = 277/440 (62%), Gaps = 1/440 (0%)

Query: 1   MHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF 60
           + R + E   L  LA P++IA +A T MGFVDT+MAG VS  D+AAV++  SIW+P  L 
Sbjct: 7   LRRVRLELRTLFALALPMMIAQLASTAMGFVDTVMAGRVSPHDLAAVALGNSIWVPVYLL 66

Query: 61  GVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEE 120
             G+ +A  P VAQ  GAG   +I   V Q L +   + +    +++  + ++  M VE 
Sbjct: 67  LSGITLATTPNVAQRYGAGAHGEIGPLVRQALWMGAGIGLTSALLMWNAEPVLHLMRVEP 126

Query: 121 AMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYG 180
           A+   T+ Y+ AV    PA  L+Q LR F+DG+   +P+MVIG +GLLLNIPLN++F+YG
Sbjct: 127 ALIEPTMAYLRAVACGFPAVALYQVLRCFSDGLGHPRPSMVIGILGLLLNIPLNYVFIYG 186

Query: 181 KFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRL 240
           KFG P +GGVGCGV+TA+V   ML+ +  ++  +      ++F  F  P+   L  L  +
Sbjct: 187 KFGIPAMGGVGCGVSTALVMLFMLIAMSVWVKRAPAYQRSQLFSHFEWPRWPMLRHLLSV 246

Query: 241 GFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGH 300
           G P+  A+F E ++F+V+ALL+  LG+TVVA HQ+ALNF+SL+FM P+S+G AV++R+G 
Sbjct: 247 GVPIGIAVFAEASIFSVIALLIGALGATVVAGHQIALNFTSLIFMIPLSLGMAVTVRIGQ 306

Query: 301 KLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFA 360
           +LG    + A   A VG+   L  AC +A + +LF EQIA +YT +  V+A+A  L  +A
Sbjct: 307 ELGRSAPRDARFVAGVGIAAALVYACFSASVMLLFSEQIARIYTPDPAVIAVAASLFFYA 366

Query: 361 AIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKG 420
           A++Q  D VQV AAG+LRGY+D       T  +YW +GLP GY+LG+T+ L     G  G
Sbjct: 367 ALFQFSDVVQVTAAGALRGYQDTRMTMIYTLFAYWGIGLPVGYLLGLTDHL-GTATGPAG 425

Query: 421 FWLGFIIGLSAAALMLGQRL 440
            W G I GLS AAL+L  RL
Sbjct: 426 LWQGLIAGLSCAALLLSVRL 445