Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

 Score =  191 bits (486), Expect = 3e-53
 Identities = 131/446 (29%), Positives = 206/446 (46%), Gaps = 10/446 (2%)

Query: 2   HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFG 61
           H   KE   +++LA P++ + +A   M F DT+M G +    +A   + A+ +     F 
Sbjct: 3   HSALKELWIILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFVSFFC 62

Query: 62  VGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEA 121
           VG++ A+  +V+  +GAG           GL LA  +++    +L+  + I+      EA
Sbjct: 63  VGVMAAVGTLVSIRHGAGDTEGATRLTQAGLWLAWGMALVAALLLWNLEPILLQFGQAEA 122

Query: 122 MATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGK 181
                  ++  + FA+P  L F ALR FT  +    P M I   G   N  LN+  ++  
Sbjct: 123 NVHMAAQFLITLPFALPGLLSFMALRGFTSALGRAGPVMTISLAGAAANFVLNYALIHQW 182

Query: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 241
            G P LG +G G+ TAIV   M L L  +I      A   + +   K     L  L+RLG
Sbjct: 183 LGLPNLGLMGIGLVTAIVTNCMALALALHIRLHPAYAAYPIRKGLSKLSRSHLGELWRLG 242

Query: 242 FPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 301
            P+      EV LF   A  +  +GST +AAHQ+AL   S+ FM P+ +  AV++R+G  
Sbjct: 243 LPIGGTYAVEVGLFTFAAFCMGAMGSTQMAAHQIALQTVSMAFMVPVGMSYAVTMRIGQH 302

Query: 302 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQ-----VVVALAMQL 356
            G  +     +A  +G+  G     +  LL  L    +  L+ +        +V LA +L
Sbjct: 303 YGAGNLLMVRMAGRLGIGFGGCVMLMFGLLFWLAPHLVIGLFLDINDPAFAEIVVLATKL 362

Query: 357 LLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPL 416
           L  AA+++  D  Q +A G++RG KD    F      YW++  P  ++LG +        
Sbjct: 363 LAIAALFEFFDGTQTIAMGAIRGLKDARTTFLIGLGCYWLIAAPAAWLLGFST-----DA 417

Query: 417 GAKGFWLGFIIGLSAAALMLGQRLYW 442
           GA G W G  +GL  +A+ L     W
Sbjct: 418 GASGVWWGLALGLFCSAVALTYAFEW 443