Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., MATE family efflux transporter from Synechocystis sp000284455 PCC 6803

 Score =  206 bits (523), Expect = 2e-57
 Identities = 128/433 (29%), Positives = 217/433 (50%), Gaps = 10/433 (2%)

Query: 7   EASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLM 66
           EA   +KLA P+  A +AQ   GFVDT+M G +    +AA  +A  I++  ++ GVGL+ 
Sbjct: 13  EAREFLKLAVPLAGAQMAQAATGFVDTVMMGWLGQDVLAAGGLATMIFMAFMMTGVGLIS 72

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126
            + P+VA+  GAG+  +I     QGL + LL+S+P +  +     ++ +    +     +
Sbjct: 73  GVSPLVAEAYGAGQTRRIGQLTRQGLWIVLLLSIPGMLFITHLNGVMHWSGQADTTIILS 132

Query: 127 VGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPE 186
             Y++ + + +   + F  LR     +S  +P M+I     L NI  N+   +GK+G P 
Sbjct: 133 DSYLNVMAWGLFPAIAFATLRGCIIALSQARPIMLIVIAATLFNILGNYGLGFGKWGFPA 192

Query: 187 LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAA 246
           LG  G  +A+   +WIM L LL Y++  K L    +F++ H  +P+ L +L  +G P+  
Sbjct: 193 LGITGLAIASISAHWIMFLSLLVYMLWHKPLHQYSLFDSLHHLKPRILQQLLWVGGPIGI 252

Query: 247 ALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQD 306
           A   E  L+   +  +  LG+ ++AAHQV      ++FM P+++  A ++RVG   G+Q 
Sbjct: 253 AAVLEYGLYLTASFFMGALGTPILAAHQVVSQTVLVLFMVPLAMSYAATVRVGQWFGQQH 312

Query: 307 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTE-----NQVVVALAMQLLLFAA 361
                 AA V +   +       +  + + +QI  LY +     N   + + + ++  AA
Sbjct: 313 WPQIRQAALVSIGLAVLFMLTAGIALLAYPQQIIGLYLDLNDPANGEALNVGISIMKIAA 372

Query: 362 IYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGF 421
               +D +Q  A G L+G +D         I+YW +GL   Y+LG        PL   G 
Sbjct: 373 FGLVLDGLQRTANGVLQGLQDTRIPMVLGTIAYWGIGLTASYLLGFYT-----PLSGAGV 427

Query: 422 WLGFIIGLSAAAL 434
           W+G  IGL+AA++
Sbjct: 428 WIGTYIGLAAASI 440