Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  230 bits (586), Expect = 8e-65
 Identities = 139/440 (31%), Positives = 222/440 (50%), Gaps = 14/440 (3%)

Query: 14  LATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVA 73
           L  P + A +AQ  +   D +M G + A  +AA+ +A  ++    +FG G   A+VP+VA
Sbjct: 27  LGVPFIGAQLAQLAINTTDVLMVGQLGATQLAAIILATQVFFTIFIFGSGFANAVVPMVA 86

Query: 74  QLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAV 133
           Q  G G Q  +   V  G+ + LL  V    VL+  + I+ F   +  +A     Y+H  
Sbjct: 87  QAQGRGDQVSVRRSVRMGMWVVLLYGVLTAPVLWMAEPILLFAGQKPEVAALAGEYLHIA 146

Query: 134 IFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCG 193
            +A+   L+F  LR+F  G+      + +  + L+LN  L ++ ++G FG PELG  G  
Sbjct: 147 QWAIFPSLIFMVLRAFLSGLERAGVILYVTLVTLVLNAALCYVLIFGHFGFPELGIFGAA 206

Query: 194 VATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALFFEVT 253
           VA   V  +   L + YI     L   ++F  F +P       +  LG P++  +  EV+
Sbjct: 207 VAALGVALLGAALTIGYIRRQPELHRFELFVRFWRPDWPAFGEVVHLGIPISVTILAEVS 266

Query: 254 LFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIA 313
           LF V +LL+  +G+  +AAH +AL F+S+ FM P+ +  A ++R+G   G  D  G   A
Sbjct: 267 LFTVASLLMGTIGTIELAAHGIALQFASIAFMIPLGLAQAGTVRIGLAYGSGDMVGVKRA 326

Query: 314 ANVGLMTGLATACITALLTVLFREQIALLYTENQ-----VVVALAMQLLLFAAIYQCMDA 368
           A   L  G+  A + + +  LF  ++A LY + +      V+A A  L++ A  +Q +D 
Sbjct: 327 AIAVLTLGVGFAAVGSTIFALFPHELAGLYLDTRRPDAAEVLAFAGPLIVIAGAFQLVDG 386

Query: 369 VQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPL--GAKGFWLGFI 426
           +Q +AAG LRG KD T       I+YW +G           W    PL  G  G W GF+
Sbjct: 387 LQAIAAGMLRGLKDTTIPMILAMIAYWPIGF-------FCAWAFAFPLGFGGVGVWFGFV 439

Query: 427 IGLSAAALMLGQRLYWLQKQ 446
           +GL++AAL+L  R + L ++
Sbjct: 440 LGLASAALLLNWRFFRLLRR 459



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 37/188 (19%), Positives = 74/188 (39%), Gaps = 11/188 (5%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVP 70
           ++ L  P+ +  +A+  +  V +++ G +  I++AA  IA      + +  +GL  A   
Sbjct: 250 VVHLGIPISVTILAEVSLFTVASLLMGTIGTIELAAHGIALQFASIAFMIPLGLAQAGTV 309

Query: 71  VVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAV------LFQTQFIIRFMDVEEAMAT 124
            +    G+G        V +  I  L + V   AV      LF  +    ++D     A 
Sbjct: 310 RIGLAYGSGDM----VGVKRAAIAVLTLGVGFAAVGSTIFALFPHELAGLYLDTRRPDAA 365

Query: 125 KTVGYMHAVIFAVPAYLLFQALRSFTDGMSL-TKPAMVIGFIGLLLNIPLNWIFVYGKFG 183
           + + +   +I    A+ L   L++   GM    K   +   + ++   P+ +   +    
Sbjct: 366 EVLAFAGPLIVIAGAFQLVDGLQAIAAGMLRGLKDTTIPMILAMIAYWPIGFFCAWAFAF 425

Query: 184 APELGGVG 191
               GGVG
Sbjct: 426 PLGFGGVG 433