Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  445 bits (1145), Expect = e-129
 Identities = 225/439 (51%), Positives = 309/439 (70%), Gaps = 1/439 (0%)

Query: 7   EASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLM 66
           +A  LI+LA PVLIA V QT MGF+DT+MAG VSA+DMAAV++  S+WLP++LF  GLLM
Sbjct: 7   QAKKLIQLALPVLIAQVTQTMMGFIDTLMAGRVSAVDMAAVAVGTSLWLPALLFVQGLLM 66

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126
           A  PV +QL+GA  +  I    +Q   +A++ +  ++  L  +  I+  MD+E  +   +
Sbjct: 67  AFTPVFSQLHGADDEASIRPLAYQAAYIAIIGAFAVMLFLGLSSEILTRMDLETDLRQLS 126

Query: 127 VGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPE 186
            GY+   ++ VPA++++Q LR  ++G+S T P MVIGF+GL +NIP N+IF+YG FG P 
Sbjct: 127 EGYLFGFLWGVPAFVMYQVLRGMSEGISYTLPTMVIGFVGLAVNIPANYIFIYGHFGMPA 186

Query: 187 LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAA 246
           +GG GCGVATA+V+W ML+ +L Y+   K+ A V  F+ F +P+   + R+ +LGFP+A 
Sbjct: 187 MGGAGCGVATALVFWAMLIAMLIYMAFHKKFALVSPFKAFEQPKISTMWRMTKLGFPIAM 246

Query: 247 ALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQD 306
           ALFFEV+LFA++ALL+APLG+ VVA HQ+ALNFSS+VFM P+SIG AVSIR+G+ LG + 
Sbjct: 247 ALFFEVSLFAIIALLLAPLGANVVAGHQIALNFSSIVFMLPLSIGLAVSIRIGYYLGREK 306

Query: 307 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCM 366
              AA+ A VGL   L  A ITA++TV+FR +IA LY  +  VVALA  L+L AA+YQ  
Sbjct: 307 ADVAALVAKVGLGLALFLASITAVITVVFRVEIARLYNTDPNVVALASSLMLMAALYQLS 366

Query: 367 DAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFI 426
           D+VQVVAAG+LRGYKD  + F+ T ISYW +G+  GY L  T+WL    +GA GFW G I
Sbjct: 367 DSVQVVAAGALRGYKDTRSAFYITLISYWAIGMTLGYTLAYTDWLV-PAMGAHGFWTGLI 425

Query: 427 IGLSAAALMLGQRLYWLQK 445
            GL+ AA +   RL ++QK
Sbjct: 426 AGLTTAAALFAIRLRYIQK 444