Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  216 bits (550), Expect = 1e-60
 Identities = 132/449 (29%), Positives = 230/449 (51%), Gaps = 16/449 (3%)

Query: 4   YKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVG 63
           ++ E    + LA P+++ ++AQ  +   D ++ G + +  +AA ++AA ++   +LFG+G
Sbjct: 16  WRTELGATLSLAWPLILTNLAQAALTTTDLLLIGSLGSRSLAAAAMAAGLFQALMLFGLG 75

Query: 64  LLMALVPVVAQLNGAGRQ--HKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEA 121
           L+ A +P++A   G  R     +   V QGL  A L+S+P+  +L+ T+ ++     E A
Sbjct: 76  LVSATLPLLATALGRNRHSVRDVRRTVRQGLWSAGLISLPLWLILWHTEAVLIAFGQEPA 135

Query: 122 MATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGK 181
           +A +  G+MH + + +  +L +  LR+F   +      +++  + +  N    W  ++G 
Sbjct: 136 LAAEAAGFMHTLQWGLLPFLGYIVLRAFLSALERPMWPLLVAGLAIGFNALAAWALIFGH 195

Query: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 241
            G P LG  G GV++++    M+  L   I   +RL   ++F  F +P    L+ L+RLG
Sbjct: 196 LGLPALGLPGAGVSSSLSSLFMVAGLALVITRQRRLKRYRLFGRFWRPDWPRLVTLWRLG 255

Query: 242 FPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 301
            P+A +  FEV++F    +++  LG+  +AAH +AL  ++L FM P+ +G A ++RVG  
Sbjct: 256 LPMAISFAFEVSIFQASMMMMGILGADALAAHTIALQIATLTFMVPLGLGQAATVRVGRA 315

Query: 302 LGE------QDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQ 355
           LG       +     A  A V  M G A   + ++  +L    +     EN  V+ LA+ 
Sbjct: 316 LGAGTIPALRRAGWVAYGAGVAFMGG-AALMMLSVPRLLIGAFLDADLAENAPVIDLAVV 374

Query: 356 LLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQP 415
           L+  AA++Q  D  Q V  G LRG  D         + YW LGLP G +L          
Sbjct: 375 LMALAALFQIADGAQAVCNGMLRGLHDTKVPMLLAALGYWGLGLPLGALLAF-----PLG 429

Query: 416 LGAKGFWLGFIIGLSAAALMLGQRLYWLQ 444
           +GA G W+G   GLS  A+++ +R  W++
Sbjct: 430 VGAPGVWIGLAGGLSVVAVLMTRR--WIR 456