Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., MATE family efflux transporter from Rahnella sp. WP5

 Score =  491 bits (1263), Expect = e-143
 Identities = 250/458 (54%), Positives = 323/458 (70%), Gaps = 2/458 (0%)

Query: 1   MHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF 60
           M +Y  EA  L+ LA PV++A +AQT MG VDTIMAG VSA DMAAV++  SIWLP+ILF
Sbjct: 1   MQKYLAEARVLLALAIPVILAQIAQTSMGVVDTIMAGSVSATDMAAVAVGTSIWLPAILF 60

Query: 61  GVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFM-DVE 119
           G GLL++L P +A LNGAGR+ KI  +V Q   LA  VSV IIAVL Q   I+  M +++
Sbjct: 61  GHGLLLSLTPTIAHLNGAGRRDKIGHQVQQEFWLASGVSVLIIAVLSQCDHILSLMHNID 120

Query: 120 EAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVY 179
             +  K VGY+HA+++  P YL FQ LR   +G+S TKP MV GFIGLL+NIP+N+IF+Y
Sbjct: 121 PELKAKAVGYLHAIMWGAPGYLFFQVLRDQCEGLSKTKPGMVFGFIGLLVNIPVNYIFIY 180

Query: 180 GKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFR 239
           GKFGAP LGGVGCGVAT  VYW+M  ++  Y+  ++ L   +    F KP    L RL +
Sbjct: 181 GKFGAPALGGVGCGVATGTVYWVMFFIMRIYVRRNRALRDTQPHSRFAKPDWPTLRRLIQ 240

Query: 240 LGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVG 299
           LG P+A ALFFEVTLFA+VALLV+PLG   VA+HQ+ALN  SL+F+ P+S+G A +IRVG
Sbjct: 241 LGMPIALALFFEVTLFAIVALLVSPLGIVAVASHQIALNVGSLMFVIPLSLGVAATIRVG 300

Query: 300 HKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLF 359
            +LGE   +GA IAA   + TG+  AC T+L  ++FRE IA LY ++  VV LA  LL+F
Sbjct: 301 SRLGESSVEGAKIAAYTSIGTGIMMACCTSLTAIIFREHIASLYNDSPEVVTLASHLLIF 360

Query: 360 AAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAK 419
           AA++Q  DA+QV+ +G LRGYKD  +IF+ TF++YWVLGLP GY LG+T+ L  Q +G  
Sbjct: 361 AALFQISDAIQVIGSGILRGYKDTRSIFYITFVAYWVLGLPVGYALGLTDILVPQ-MGPS 419

Query: 420 GFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK 457
           GFW GFI+GL+ AALM+  R+ WLQKQ     L  A +
Sbjct: 420 GFWCGFILGLTFAALMMTLRMRWLQKQPSYTILQKAGR 457