Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., MATE family efflux transporter from Parabacteroides merdae CL09T00C40

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 80/346 (23%), Positives = 156/346 (45%), Gaps = 10/346 (2%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVP 70
           ++++  PVL++ + +  +G  DT   G V  +++ A ++A   +L   + G G  +    
Sbjct: 8   ILQITFPVLMSLLMEHMIGLTDTAYLGRVGEVELGASALAGVYYLVIYMLGFGFSIGAQV 67

Query: 71  VVAQLNGAGRQHKIPFEVHQG-LILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGY 129
           ++A+ NGA    +I     QG   L LL S+   A    + F +R +   + +   T+ Y
Sbjct: 68  LIARRNGAQEYKRIGLVFLQGTFFLLLLASLLFTASHLYSPFFLRKLIGSDDVYQATMKY 127

Query: 130 MHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGG 189
           +   ++      +    R+F  G++ TK   +   + +L N+ LN++ ++GKFG P LG 
Sbjct: 128 VDWRVYGFFFSFVAVMFRAFYVGITKTKILTINSVVMVLANVMLNYVLIFGKFGFPALGI 187

Query: 190 VGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALF 249
            G  +A++I   + +L  + Y  T K++ + K     +      ++R   LG  +   + 
Sbjct: 188 AGAAIASSISEAVSVLFFILY--TWKKVDYKKYGLFEYSGIDFRMLRQI-LGVSIWIMIQ 244

Query: 250 FEVTLFA--VVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDT 307
             +      V  +++   G   +A   V  + SS +FMF  +  +  S  V + +G    
Sbjct: 245 HGIAFLGWFVFFVVMEHQGERPLAITNVVRSISSFLFMFVNAFASTSSSLVSNLIGA--G 302

Query: 308 KGAAIAANVGLMTGLATACITAL--LTVLFREQIALLYTENQVVVA 351
           K   +    G M  +    +  L  L  LF E +  +YT+N  ++A
Sbjct: 303 KPEQVMGLCGRMIRICYYFVLPLGILIALFPELVLRIYTDNLDLIA 348