Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., MATE family efflux transporter from Parabacteroides merdae CL09T00C40

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 83/348 (23%), Positives = 134/348 (38%), Gaps = 30/348 (8%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAI-DMAAVSIAASIWLPSILFGVGLLMALV 69
           ++    P+L+ ++ Q     VD  + G    I D+AA+  + S+    + F  G      
Sbjct: 17  ILNFTFPLLLGNILQQTYSLVDAAIVGKFLGINDLAAIGASTSVVFLILGFCNGCCCGFG 76

Query: 70  PVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQF--IIRFMDVEEAMATKTV 127
             VAQ  GA     +   V   L LA L+S+ +IAVL       I+R M   E +     
Sbjct: 77  IPVAQKFGARDYKTMRRYVTVSLQLAALMSI-VIAVLTSVYCADILRSMQTPENIFHGAY 135

Query: 128 GYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNW--IFVYGKFGAP 185
            Y+      VP    +  L S    +  +K          +LNI L+   I V G     
Sbjct: 136 YYLLVTFIGVPCTFFYNLLSSIIRALGDSKTPFWFLLFSTVLNIVLDLFCILVLG----- 190

Query: 186 ELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFE------TFHKPQPKELIRLFR 239
             G +G G+AT +   +  LL  FY+       H  V +       F  P  K L+    
Sbjct: 191 -WGVLGAGIATVVSQGVSALLCYFYM-----YKHFPVLKGTADDRKFRFPLAKNLL---Y 241

Query: 240 LGFPVAAALFFEVTLFAVVALLVA--PLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIR 297
           +G P+   L F +T    + L  A   LG+  VAA   A+           S+G A++  
Sbjct: 242 IGVPM--GLQFSITAIGSILLQSANNALGTACVAAFTAAMRIKMFFICAFESLGIAMATY 299

Query: 298 VGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTE 345
            G   G +  +          +  +  A  T  + +   ++I+LL+ +
Sbjct: 300 TGQNYGARKPERIWQGIKASSLLMMIYAVFTFTILMSASDKISLLFVD 347