Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., multidrug resistance protein NorM from Phaeobacter inhibens DSM 17395

 Score =  211 bits (536), Expect = 5e-59
 Identities = 126/433 (29%), Positives = 218/433 (50%), Gaps = 12/433 (2%)

Query: 14  LATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVA 73
           L  P++   VAQ  +G  DT+M G      +AAV++ ++ +    L G G   A++P+VA
Sbjct: 23  LGLPLIGGHVAQFAIGLTDTVMLGWYGVEALAAVTLGSTYFFTIFLLGSGFAFAVMPMVA 82

Query: 74  QLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAV 133
              GAG + +I       L L+L   + ++ +L+ ++ I+  +  E  +A     Y+   
Sbjct: 83  AAAGAGEERQIRRSTRMALWLSLAYGLLVMPLLWWSEPILLLLGQEAEVAHGAAEYLRIA 142

Query: 134 IFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCG 193
            +A+   LL+  L+S+   +  T+  +++  +   LN  +N+  ++G +GAPELG  G  
Sbjct: 143 GWALFPALLYMVLKSYLAALERTQIVLLVSVLAAALNALINYALIFGNWGAPELGVTGAA 202

Query: 194 VATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALFFEVT 253
           +A+        + +LFY +  K L   ++ + F +P  + L R+ RLG P+      E +
Sbjct: 203 LASLATNVFACIFVLFYAL--KALPEHELLKNFQRPDWEMLSRVLRLGLPIGLTNLSETS 260

Query: 254 LFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIA 313
           LFA  A+++  LG+  + AH +AL+   L FM  + +  A +IR G+  G  D    A  
Sbjct: 261 LFAASAMMMGWLGTVALGAHGIALSLGGLAFMMHLGLSNAATIRAGNAFGRGDRDHMARG 320

Query: 314 ANVGLMTGLATACITALLTVLFREQIALLY-----TENQVVVALAMQLLLFAAIYQCMDA 368
           A V +   L  + +  +L +   E +  L+      +   +V +   LL  AA++Q MD 
Sbjct: 321 ARVVMAMSLGLSVLGMILFLAVPEALISLFLSPDDPDRAEIVLIGSVLLAAAALFQLMDG 380

Query: 369 VQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIG 428
           +QV+A G LRG +D         +SYW +G+P  Y+LG T       +G  G WLG ++G
Sbjct: 381 MQVIALGLLRGVQDTGVPMVIAALSYWAVGIPASYLLGFT-----FEMGGLGVWLGLVLG 435

Query: 429 LSAAALMLGQRLY 441
           L+AA + L  R +
Sbjct: 436 LTAAGVFLMIRFW 448



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 43/207 (20%), Positives = 79/207 (38%), Gaps = 14/207 (6%)

Query: 9   SNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMAL 68
           S +++L  P+ + ++++T +     +M G +  + + A  IA S+   + +  +GL  A 
Sbjct: 242 SRVLRLGLPIGLTNLSETSLFAASAMMMGWLGTVALGAHGIALSLGGLAFMMHLGLSNAA 301

Query: 69  VPVVAQLNGAG-RQHKI-PFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126
                   G G R H      V   + L L V   I+ +      I  F+  ++    + 
Sbjct: 302 TIRAGNAFGRGDRDHMARGARVVMAMSLGLSVLGMILFLAVPEALISLFLSPDDPDRAEI 361

Query: 127 VGYMHAVIFAVPAYLLFQA--------LRSFTD-GMSLTKPAMVIGFIGLLLNIPLNWIF 177
           V     ++ A   + L           LR   D G+ +   A+    +G+  +  L + F
Sbjct: 362 VLIGSVLLAAAALFQLMDGMQVIALGLLRGVQDTGVPMVIAALSYWAVGIPASYLLGFTF 421

Query: 178 VYGKFG---APELGGVGCGVATAIVYW 201
             G  G      LG    GV   I +W
Sbjct: 422 EMGGLGVWLGLVLGLTAAGVFLMIRFW 448