Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., putative efflux protein, MATE family from Dechlorosoma suillum PS

 Score =  223 bits (569), Expect = 8e-63
 Identities = 134/441 (30%), Positives = 228/441 (51%), Gaps = 8/441 (1%)

Query: 3   RYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGV 62
           R  +E  ++ + A P+L+A +A  G+  +DT + G   A D+AAV+I   I++  I+   
Sbjct: 12  RLGEEIRHIARHAWPILVAQLASMGLMLIDTALLGHYGAADLAAVAIGGGIYIAVIMACA 71

Query: 63  GLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAM 122
           G+L A+ PVVA L+GAGR  +I   + Q   +AL+++VP   ++     ++    +E A+
Sbjct: 72  GVLQAVAPVVAHLHGAGRHGEIAAALQQAFWVALVLAVPACLLMRFPDPLLAMATMEPAV 131

Query: 123 ATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKF 182
             KT  Y+  + + +P  LL++ L +F + +  ++P M+I      L++PL+W  + G++
Sbjct: 132 EAKTRAYLDLLAWGLPLVLLYRTLFAFANALGHSRPFMLISLATTALHLPLSWCLIQGRW 191

Query: 183 GAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGF 242
           G P LG  G G +T I+  +       Y+  S  LA + +   +H+PQ   L  L RLG 
Sbjct: 192 GGPPLGVEGTGWSTLIIVGVGFFCGFAYLRRSAALAPLALLGRWHRPQWVRLRELLRLGL 251

Query: 243 PVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL 302
           P+  +   E++ F ++AL +A  G+TVVA H++  N ++L++M P+++  A   RVG   
Sbjct: 252 PMGFSNLVEISAFTLIALFIAREGATVVAGHRIVANLAALLYMLPLAVAIATLARVGRAA 311

Query: 303 GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAI 362
           G +D  G   A   G++     + +   L       +    T +  V A+A+ L+ + A 
Sbjct: 312 GARDQAGMERAVGAGMVLATGLSLLFGGLLWWGAGPLVGAATGDGRVAAVAVGLVGYLAA 371

Query: 363 YQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLT--EQPLGAKG 420
           YQ  DA+Q VA  SLRG K          + +W +GL  G+      WL      +G  G
Sbjct: 372 YQLFDAIQTVAGFSLRGCKITFLPMLIHTLCFWGVGLGGGW------WLAYGSPAMGVAG 425

Query: 421 FWLGFIIGLSAAALMLGQRLY 441
           +W      L  AA++LG  L+
Sbjct: 426 YWAASTASLVLAAVLLGGLLW 446