Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis JJ

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 97/432 (22%), Positives = 173/432 (40%), Gaps = 34/432 (7%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF----GVGLLM 66
           ++K++ P++IA   Q+    +D I   G+ +  +AA+ +        I      G+G   
Sbjct: 18  IVKISLPMVIAMSFQSLYNIIDAIWVAGLGSDALAAIGLFFPFMFALIAISNGVGIGGSS 77

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVS--VPIIAVLFQTQFIIRFMDVEEAMAT 124
           A+   + Q N     +     +  G+IL +L++  +P +  +F        +       T
Sbjct: 78  AISRRIGQKNKDAADNIAVHSIVLGIILGILLTGVIPFLGTIFS------LIGASGNTVT 131

Query: 125 KTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGA 184
             V Y   +     A L      +   G   TK AM    +G +LNI L+ IF+Y     
Sbjct: 132 MAVEYSTILFGGAVALLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----V 187

Query: 185 PELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPV 244
             +G  G   AT +   I  +L ++++   K       FE F K     +  +F +G P 
Sbjct: 188 LNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKF-KLDINIIKEIFSIGLPA 246

Query: 245 AAA-LFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLG 303
           + + L    ++F + A++    G+  +A         S+  +  + +   V++  G   G
Sbjct: 247 SISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYG 306

Query: 304 EQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFA--- 360
             + +   I+    L  G+    I A L ++F  QI  L+T ++  V +   LL+F    
Sbjct: 307 SANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYM 366

Query: 361 -AIYQCMDAVQVVAA---GSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPL 416
              Y  +    + AA   G  +G   +     RT I    L +P  Y  G+   +  Q  
Sbjct: 367 FLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTII----LQIPMAYTFGI---IFNQ-- 417

Query: 417 GAKGFWLGFIIG 428
           G  G W G I+G
Sbjct: 418 GLTGVWFGMILG 429