Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., MATE family efflux transporter from Pantoea sp. MT58

 Score =  491 bits (1264), Expect = e-143
 Identities = 248/458 (54%), Positives = 331/458 (72%), Gaps = 2/458 (0%)

Query: 1   MHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF 60
           M +Y  EA  L+ LA PV++A VAQT MGFVDTIMAG VSA DMAAV++  S+WLP+ILF
Sbjct: 1   MQKYLTEARQLLALAIPVILAQVAQTAMGFVDTIMAGAVSATDMAAVAVGTSVWLPAILF 60

Query: 61  GVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFM-DVE 119
           G GLL+AL P VAQLNG+GR+ +I  ++ QG  LA  VS+ I+ +L+   ++IR M D++
Sbjct: 61  GHGLLLALTPTVAQLNGSGRRERIGEQIRQGYWLAFFVSLLIMVLLWHAGYLIRAMHDID 120

Query: 120 EAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVY 179
            A+A K  GY+HA++F  P YL FQ LR+  +G+S TKP MV+GF+GL+ NIPLN++F+Y
Sbjct: 121 PALALKAEGYLHALLFGAPGYLFFQVLRNQCEGLSKTKPGMVLGFLGLMFNIPLNYVFIY 180

Query: 180 GKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFR 239
           G FG P LGGVGCGVATA VYW+M + + F++     +  +++   +  P    L RL  
Sbjct: 181 GHFGMPALGGVGCGVATASVYWVMFICMRFWVRRMGSMRDIRLESRWSPPSRPILSRLMT 240

Query: 240 LGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVG 299
           LG PVA ALFFEVTLFAVVALLV+PLG   VA HQ+ALNFSSL+F+ P+S+G A +IRVG
Sbjct: 241 LGLPVALALFFEVTLFAVVALLVSPLGIVNVAGHQIALNFSSLMFVLPLSLGVATTIRVG 300

Query: 300 HKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLF 359
           ++LG+  T+ A +AA      G++ A +TA+ TV FR QIALLY +N  VV LA QL+L 
Sbjct: 301 YRLGQGSTEQARVAAWTAQGVGISMAALTAIFTVTFRHQIALLYNDNSEVVTLAAQLMLL 360

Query: 360 AAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAK 419
           AAIYQ  D++QV+ +G LRGYKD  +IF  TFI+YW+LGLP GY+L +T+W+  + +G  
Sbjct: 361 AAIYQFSDSIQVIGSGILRGYKDTRSIFFITFIAYWLLGLPAGYLLALTDWIVPR-MGPA 419

Query: 420 GFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK 457
           GFW GFIIGL++AALM+  R+  LQ+   D+ L  AA+
Sbjct: 420 GFWCGFIIGLTSAALMMLWRIRRLQQLPADIILTRAAR 457