Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., MATE family multidrug exporter from Klebsiella michiganensis M5al

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 101/444 (22%), Positives = 187/444 (42%), Gaps = 22/444 (4%)

Query: 14  LATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVA 73
           LA P+L+ +     MG + T +   +    MA V +A S  +  + F   + +    VVA
Sbjct: 34  LAVPILLENACVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVIMSFFAAIDLGTTVVVA 93

Query: 74  QLNGAGRQHKIPFEVHQGLILALLVSVPIIAVL--FQTQFIIRFM--DVEEAMATKTVGY 129
              G   + +      Q L +  L S+ + AV+  F  + II F+  D  E +    + Y
Sbjct: 94  FSLGKRDRRRARAAARQSLAIMTLFSIILAAVIHAFGAE-IINFVAGDATEEVKGLALTY 152

Query: 130 MHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGG 189
           +   + + PA  +         G   TK  ++I     +LNI ++ I +YG F  P +G 
Sbjct: 153 LELTVLSYPAAAIALIGSGALRGAGTTKIPLLINGGMNILNIIISSILIYGIFSWPGMGF 212

Query: 190 VGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELI-RLFRLGFPVAAAL 248
           VG G+   I  +I  +  ++ ++     A     +++ KP    +I  +  +G P +   
Sbjct: 213 VGAGLGLTIARYIGAVATIWVLMIGFNPALRISLKSYFKPFNFAIIWEVMGIGIPAS--- 269

Query: 249 FFEVTLF----AVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGE 304
             E  LF     +  + VA +G+ V+A + +A + ++L+ +   ++G+A +I  G +LG+
Sbjct: 270 -IESVLFNGGKLLTQMFVAGMGTNVIAGNFIAFSVAALINLPGNALGSASTIITGRRLGK 328

Query: 305 QDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQ 364
                A   A            + A  T      IA  YT  + V  +  +LL   A + 
Sbjct: 329 GQIGQAERQAWHVFWLSTIILTVIAWGTAPLAGLIASFYTSEEDVKVVVKELLWLNAFFM 388

Query: 365 CMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLG 424
            + A+      + +G +D+      + +  W   +  GY LG+        +G  G WLG
Sbjct: 389 PIWAMAWTLPCAFKGARDVRYTMWVSMLGMWGCRVVAGYTLGIV-----LGMGVIGVWLG 443

Query: 425 FIIGLSAAALMLGQRLY---WLQK 445
            ++  +   ++   R+    WL K
Sbjct: 444 MVLDWAVRGVLFYCRMVSGRWLWK 467