Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., MATE family efflux transporter from Klebsiella michiganensis M5al

 Score =  493 bits (1268), Expect = e-144
 Identities = 252/458 (55%), Positives = 335/458 (73%), Gaps = 2/458 (0%)

Query: 1   MHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF 60
           M +Y  EA  L+ LA PV++A VAQT MGFVDT+MAGG SA DMAAV+I  SIWLP+ILF
Sbjct: 1   MQKYFIEARQLLALAIPVILAQVAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILF 60

Query: 61  GVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFM-DVE 119
           G GLL+AL PV+AQLNG+GR+ +I  +V QG  LA  VS+ ++ VL+   +II  M +++
Sbjct: 61  GHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSILVMVVLWNAGYIISSMHNID 120

Query: 120 EAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVY 179
            AMA K VGY+ A+++  P YL FQ  R+  +G++ TKP MV+GFIGLL+NIP+N+IF+Y
Sbjct: 121 PAMADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIY 180

Query: 180 GKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFR 239
           G FG PELGG+GCGVATA VYW+M   +LF++  ++ +  + + E F KP    + RL +
Sbjct: 181 GHFGMPELGGIGCGVATASVYWVMFFSMLFWVRRARSMRDIHLQERFSKPDFAVIQRLVQ 240

Query: 240 LGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVG 299
           LG P+A ALFFEVTLFAVVALLV+PLG   VA HQ+ALNFSSL+F+ P+S+ AAV+IRVG
Sbjct: 241 LGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPLSLAAAVTIRVG 300

Query: 300 HKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLF 359
            +LG+  T  A  +A  G+  G+  A  TA+ T+L R+QIALLY +N  VVALA QL+L 
Sbjct: 301 FRLGQGSTLEAQTSARTGVGVGVCMAVFTAVFTILMRKQIALLYNDNPEVVALASQLMLL 360

Query: 360 AAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAK 419
           AAIYQ  D+VQV+ +G LRGYKD  +IF  TF +YWVLGLP+GY+L +T+ L    +G  
Sbjct: 361 AAIYQISDSVQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYLLALTD-LVVPRMGPA 419

Query: 420 GFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK 457
           GFW GFIIGL++AA+M+  R+ +LQ+Q   + L  AA+
Sbjct: 420 GFWCGFIIGLTSAAVMMMLRMRFLQRQPSSIILQRAAR 457