Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., MATE efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (278), Expect = 4e-29
 Identities = 100/432 (23%), Positives = 178/432 (41%), Gaps = 15/432 (3%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVP 70
           ++ +  P++    + T M F D +     S   +AA   A    L  +L  +G+      
Sbjct: 25  VLHIGLPLVAGMASTTVMQFTDRLFLSHYSVESIAAALPAGLASLLLLLTCMGVTGYASV 84

Query: 71  VVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYM 130
            +AQ  GAG+ H++   + Q LI +L+    +       + I         +      Y 
Sbjct: 85  FIAQYIGAGQPHRVGGVLWQSLIASLVFGGLLAMTSLLAEPIFSLAGHAPELQRLEETYF 144

Query: 131 HAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGV 190
             +       L+  +L +F  G   T+P M+      ++N+PL+++ + G +  PE+G  
Sbjct: 145 IILQLGSVLSLVGNSLGTFFSGRGRTRPVMLANIAAAVVNVPLDYVLINGVWFFPEMGIA 204

Query: 191 GCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALFF 250
           G  VAT + + +  +LL   +          V   + +     + RL R G P     F 
Sbjct: 205 GAAVATVMGWGVTAVLLAIAVFNRDHETRFGVRSQW-RFDAVMMRRLMRYGLPSGVNFFM 263

Query: 251 EVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGA 310
           E+        +V  LG   +AA  +A + +S+ F+  + +  AV   VG  +G  D  GA
Sbjct: 264 ELFAVTWFVFVVGTLGEVALAATNIAFSINSVAFLPTVGLNIAVGTMVGQAMGRGDPDGA 323

Query: 311 AIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVA-------LAMQLLLFAAIY 363
           A A    L   +A     AL+ VL    +  L+  + +  A          +LL + A Y
Sbjct: 324 ARATGSTLHVAMAWMTALALVFVLLPGPLVDLFRPDNLTPAAYADIRETTARLLAYVAFY 383

Query: 364 QCMDAVQVVAAGSLRGYKDMT-AIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFW 422
              D++ ++  G+L+G  D    +++ T    +VL +P  Y L    W +   L     W
Sbjct: 384 CLFDSLTIIFCGALKGAGDTAFVMWNMTVGCIFVLIIP-AYALRALGWWSLDSL-----W 437

Query: 423 LGFIIGLSAAAL 434
           L F + +S  A+
Sbjct: 438 LVFSVYVSVLAV 449