Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., MATE efflux family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  161 bits (407), Expect = 5e-44
 Identities = 122/451 (27%), Positives = 220/451 (48%), Gaps = 22/451 (4%)

Query: 7   EASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLM 66
           E + L++L+ P++I   A   +G +DT+M   +    +AA  I  S+ +  +    GL+ 
Sbjct: 15  ELAPLLRLSIPLMIGLAAPMLIGVIDTVMIAPLGTEPLAAAGITTSVVIILLSSLWGLVT 74

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126
                +AQ  GAG +  +  E+  GL L+L      +A++      +  +   +++    
Sbjct: 75  MTGIRIAQAEGAGDRPGVAIELKTGLWLSLAAGGLGMALMLAILPALGLLGQPDSVRAIL 134

Query: 127 VGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPE 186
            GY  ++   +  +  F  ++   D +      + + ++G+++N+PLNW+ +Y       
Sbjct: 135 PGYWVSMAVWLLPFTAFYVIKGLFDAVDRPWAGVALSYLGVVVNLPLNWLLIY----PAG 190

Query: 187 LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRL---FRLGFP 243
           LG +G G+A+ +   + L         +K LA  +V      P P   +RL    R G+P
Sbjct: 191 LGLLGAGLASILSQTLALGAAWLVWRRAKGLAPWRV------PVPAGALRLRAQIRDGWP 244

Query: 244 VAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVG--HK 301
           +      E   +A++ L++  +G+T +AA+Q+     ++ ++FP+ +  A SIRVG  H 
Sbjct: 245 LVVGYAGEGGAYALIGLMMGWVGATALAANQIVHTVGAVGYVFPLGMAMAASIRVGLAHG 304

Query: 302 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAA 361
            G+     A + A + ++TG     +   L  +  + ++ L +++  VVALA  L +  A
Sbjct: 305 AGQTGRLRAILRAALTVVTGWMILLMAFFL--IAGDWLSGLLSDDPEVVALAATLFIALA 362

Query: 362 IYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGF 421
             Q  D VQ  + G+LRG  DM      + I+YW L LP  Y LG   W     LGA G 
Sbjct: 363 CMQIADGVQSTSLGALRGMGDMRWPTAMSLIAYWPLALPAAYALGF--W---AGLGALGL 417

Query: 422 WLGFIIGLSAAALMLGQRLYWLQKQSDDVQL 452
           W+GF +GL+ AA+ML  R + L  ++  +Q+
Sbjct: 418 WVGFGLGLAIAAIMLPLRFWHLTGRAPAMQI 448