Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., putative transport protein, multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  203 bits (517), Expect = 8e-57
 Identities = 133/451 (29%), Positives = 223/451 (49%), Gaps = 11/451 (2%)

Query: 4   YKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVG 63
           YK+    LI L  P++I  +    +GF DT+M G  S I++ A S   +++   I+F  G
Sbjct: 8   YKEHYKALISLGLPIVIGQIGVIVLGFADTLMIGHHSTIELGAASFVNNVFNLVIIFSTG 67

Query: 64  LLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMA 123
               L P+V  L G  +       +   L+  LLV+  +   +    F +  +   E + 
Sbjct: 68  FSYGLTPIVGGLYGTHQYASAGQALRNSLLANLLVAFLLTIGMTVLYFNVGNLGQPEELI 127

Query: 124 TKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFG 183
                Y   ++ ++   +LF   + FTDG++ TK AM I   G +LNI  N+I +YGK G
Sbjct: 128 PLIKPYYLVLLASLVFVMLFNGFKQFTDGITDTKTAMWILLGGNVLNIIGNYILIYGKLG 187

Query: 184 APELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELI--RLFRLG 241
            PE+G +G G++T     +M+++ +   + S R    K+   F++    + I  RL  LG
Sbjct: 188 LPEMGLLGAGISTLFSRIMMVVVFIIVFMRSPRFLRFKL--GFYRLGWSKAIFGRLNSLG 245

Query: 242 FPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 301
           +P+A  +  E   F++ A+++  LG+  +A+HQV L  S   FM    +GAAV++RV + 
Sbjct: 246 WPIAFQMGMETASFSLSAVMIGWLGTIALASHQVMLAISQFTFMMYYGMGAAVAVRVSNF 305

Query: 302 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAA 361
            G+ D      +A  G    +A   + + +  L R  +   +T++  V A+   L+L   
Sbjct: 306 NGQGDILNVRRSAYAGFHLMMALGVVLSSIVFLCRNYLGGWFTDSTEVAAMVTSLILPFL 365

Query: 362 IYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILG-MTNWLTEQPLGAKG 420
           +YQ  D +Q+  A +LRG  D+  +    FI+Y+++ LP GY  G +  W      G  G
Sbjct: 366 VYQFGDGLQITFANALRGISDVKLMMLIAFIAYFLISLPVGYFCGFVLEW------GIIG 419

Query: 421 FWLGFIIGLSAAALMLGQRLYWLQKQSDDVQ 451
            W+ F  GL++A LML  R +   K    +Q
Sbjct: 420 VWMAFPFGLTSAGLMLWWRFHHKTKLPPSIQ 450