Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score = 97.4 bits (241), Expect = 8e-25
 Identities = 76/335 (22%), Positives = 149/335 (44%), Gaps = 6/335 (1%)

Query: 14  LATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVA 73
           +A P+LI+ + +  +G  DT   G V  I++ A +IA   +L   +   G  +    ++A
Sbjct: 13  IAYPILISLIMEQLIGMTDTAFLGRVGEIELGASAIAGVYYLAIFMMAFGFSVGAQILIA 72

Query: 74  QLNGAGRQHKIPFEVHQGLILALLVSVPI--IAVLFQTQFIIRFMDVEEAMATKTVGYMH 131
           + NG G   +I    +QG+   ++V+  +  ++++F + FI++ +     +      Y+H
Sbjct: 73  RRNGEGNYKEIGPIFYQGIYFLVVVAAILFTLSIVF-SPFILKNIISSPHIYDAAESYIH 131

Query: 132 AVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVG 191
             ++      +    R+F  G + TK   +   + +L N+  N+I ++GKFG P+LG  G
Sbjct: 132 WRVYGFFFSFVGVMFRAFFVGTTQTKTLTLNSIVMVLSNVVFNYILIFGKFGFPQLGIAG 191

Query: 192 CGVATAIVYWIMLLLLLFYIVTSKRLAHVK-VFETFHKPQPKELIRLFRLGFPVAAALFF 250
             + +++    ++ ++ F I T KR+   K       K Q + L R+  +        F 
Sbjct: 192 AAIGSSLAE--LVSVIFFIIYTWKRIDCKKYALNILPKFQSRTLKRILNVSVWTMIQNFV 249

Query: 251 EVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGA 310
            ++ + +  L V  LG   +A   +  N S + FM  M+  A     V + +G  +    
Sbjct: 250 SLSTWFMFFLFVEHLGERSLAIANIIRNVSGIPFMIAMAFAATCGSLVSNLIGAGEKDCV 309

Query: 311 AIAANVGLMTGLATACITALLTVLFREQIALLYTE 345
               N  +  G        +   LF + I  +YT+
Sbjct: 310 RGTINQHIRIGYVFVLPILIFFCLFPDLILRIYTD 344