Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  442 bits (1137), Expect = e-128
 Identities = 223/446 (50%), Positives = 308/446 (69%), Gaps = 1/446 (0%)

Query: 7   EASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLM 66
           +A  LI+LA PVLIA V QT MGF+DT+MAG VSA+DMAAV++  S+WLP+ILF  GLLM
Sbjct: 7   QAKRLIQLALPVLIAQVTQTMMGFIDTVMAGRVSAVDMAAVAVGTSLWLPAILFVQGLLM 66

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126
           A  P+ A  NGA  Q  I     QG  LAL+  + ++A L     ++  M++E  +   T
Sbjct: 67  AFTPLFAHHNGANNQKAIQPLAFQGAYLALIGGLGVMAFLASAPLVLSHMNLEPQLYNLT 126

Query: 127 VGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPE 186
           +GY+  +++  PA++L+Q LR  ++G+S T P M+IGF+GL +NIP N+IF+YG FG P 
Sbjct: 127 IGYIDGILWGAPAFVLYQVLRGCSEGISYTLPTMIIGFVGLAVNIPANYIFIYGHFGMPA 186

Query: 187 LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAA 246
           +GG GCGVATA+V+W ML+ +  Y+   K+ A +  F  FH+P    + ++ +LG P+A 
Sbjct: 187 MGGAGCGVATALVFWAMLIAMTIYMQLHKKFAALAPFSQFHRPDFATMKKMTKLGMPIAM 246

Query: 247 ALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQD 306
           ALFFEV+LFA++ALL+APLG+TVVA+HQ+ALNFS++VFM P+SIG AVSIR+G+ LG   
Sbjct: 247 ALFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIRIGYYLGRDR 306

Query: 307 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCM 366
              +A+ A VGL   L+ A  TA+LTVLFR QIA LY  +  VV LA  L+L AA+YQ  
Sbjct: 307 ADISAVVAKVGLWLALSLALSTAILTVLFRFQIAELYNSDPEVVVLAGSLMLMAALYQLS 366

Query: 367 DAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFI 426
           D++QVVAAG+LRGYKD  + F+ T  SYW +G+  GY L  T+++    +GA GFW G I
Sbjct: 367 DSIQVVAAGALRGYKDTRSAFYITLFSYWGIGMTLGYTLAYTDFIV-PAMGAHGFWTGLI 425

Query: 427 IGLSAAALMLGQRLYWLQKQSDDVQL 452
            GL++AAL+   RL ++QK    + L
Sbjct: 426 AGLTSAALLFFIRLRYIQKHGVHLSL 451