Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  138 bits (347), Expect = 9e-37
 Identities = 102/362 (28%), Positives = 184/362 (50%), Gaps = 12/362 (3%)

Query: 314 STISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLDLVGP 373
           S + A  +   ++  LL L I A+   LR  +G A+ +I      LTQ     RL  +  
Sbjct: 277 SALVATLIAMLVTVGLLGLLINALMRPLRS-MGSAMQSIADGEGDLTQ-----RLHSLSR 330

Query: 374 QDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSL-AAQNQALLT- 431
            +F  +A   N+ +    +S+  V  +     Q  +L+   ++ SN SL ++  QA LT 
Sbjct: 331 DEFGMMAGGFNRFVERIQQSIREVLASS---VQLTQLAAQVSQASNASLKSSDTQAALTH 387

Query: 432 -MAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDA 490
            +A  IN+L A+ +EIA  +  + + + +  + + +G  V++++   +  L + +     
Sbjct: 388 NVATAINELGAAAQEIARSAAHASSRASDTRDQTQEGQSVVQRSISAMSQLSSQVVNTRQ 447

Query: 491 AMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASD 550
            +  LN++   I  ++D+I GI+D TNLLALNAAIEAARAG+ GRGFAVV+DEVR LA  
Sbjct: 448 DIESLNEKTLKIGRILDVIKGISDQTNLLALNAAIEAARAGDAGRGFAVVSDEVRTLAHR 507

Query: 551 TSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTR 610
           T +    I  M+ EL   A  +  A+ ES++     + ++        ++   +  I   
Sbjct: 508 TQQSAQEIHSMIEELQAGAGSAVSAMLESQRHSDDNVTTARLAGERLNRVLMGIGEIDEI 567

Query: 611 VEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKY 670
              +  ATEEQ     ++++ ++ I++  QE    L + L++  ++   +   Q M++ +
Sbjct: 568 NLSVATATEEQTSVVDNLDRDISHINDLNQEMVGNLQSTLQACTELENQSRRLQQMVNTF 627

Query: 671 EL 672
           ++
Sbjct: 628 KI 629



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 54/273 (19%), Positives = 99/273 (36%), Gaps = 11/273 (4%)

Query: 35  IERVGAQFNQLSEQALPFALNNAALTQNFLEQVKYLGYGTRSQSEQELNQVLNEWQKLDA 94
           + ++ AQ +Q S  +L  +   AALT N    +  LG      + QE+ +         +
Sbjct: 361 LTQLAAQVSQASNASLKSSDTQAALTHNVATAINELG-----AAAQEIARSAAHASSRAS 415

Query: 95  QAGDEITRLQQNVQLLSSAEAVQQAEQLQREILHFQQLAQSILKLQQLQLSKTAQISEQA 154
              D+    Q  VQ   SA + Q + Q+       + L +  LK+ ++ L     IS+Q 
Sbjct: 416 DTRDQTQEGQSVVQRSISAMS-QLSSQVVNTRQDIESLNEKTLKIGRI-LDVIKGISDQT 473

Query: 155 KQFRYGLSSIGPEMGRIASFLAVDNPEAMDAANRFTASASAMESAF--LLLFIEEEMSAA 212
                  +      G      AV + E    A+R   SA  + S    L       +SA 
Sbjct: 474 NLLALNAAIEAARAGDAGRGFAVVSDEVRTLAHRTQQSAQEIHSMIEELQAGAGSAVSAM 533

Query: 213 QKYRQELKNRVAGLELAFDDFKEWYPEIKDYASLTAPYEMVLAGFQAQAVIEQIINKLED 272
            + ++   + V    LA +        I +   +     +  A  +  +V++ +   +  
Sbjct: 534 LESQRHSDDNVTTARLAGERLNRVLMGIGEIDEIN--LSVATATEEQTSVVDNLDRDISH 591

Query: 273 AQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHI 305
               N++     +   Q  T+L   S   QQ +
Sbjct: 592 INDLNQEMVGNLQSTLQACTELENQSRRLQQMV 624