Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  136 bits (343), Expect = 3e-36
 Identities = 98/358 (27%), Positives = 174/358 (48%), Gaps = 5/358 (1%)

Query: 306 VQGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLN 365
           VQ +Q +    S + L Q ++  L+ L I  ++ G        L ++ + + ++    + 
Sbjct: 311 VQLQQRLEQNRSHMVL-QAVALVLVFLLIFYLYAGFYASTRTTLQHLGQMMDKVAAGDMT 369

Query: 366 HRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQ 425
                    +   +    N  +   H+ +  V R    + + A      + +SNQ++A Q
Sbjct: 370 VNFVARSKDELGELGEVFNGTVAKIHDLIEQVGRTVAEVERQAGQVETVSARSNQAVAGQ 429

Query: 426 NQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTL 485
              +  +A  +NQ+ A+ +E+A  +  + + +    + +  G  ++E  Q  +  L + +
Sbjct: 430 RTQIELVATAMNQMSATAQEVARSAAAAVSSAHSVNDETLSGRGLVESQQGSIVRLASEI 489

Query: 486 AVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVR 545
             +   +++L     +I  ++D+I  IA+ TNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 490 DQSVQVINQLATDSQAISRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 549

Query: 546 KLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVA 605
            LA  T + T  I  M+  L +    + +A+  S +     +  SE+V+     I  AV 
Sbjct: 550 TLAKRTQQSTEEIEAMITRLHSGVGAAVKAMGTSHEMANGTVSQSEKVQQALENILGAVG 609

Query: 606 HIRTRVEQITQATEEQKRATADVNKAVAQISEQGQET----KRQLDAMLESAEQVAEI 659
            I  + +QI  A E+Q     D+++ + QI+  G+ T     +  DA  E + QV ++
Sbjct: 610 MIVDQNQQIAAAVEQQTAVAHDIDQNIVQINRAGERTAEGAHQTEDASRELSAQVVQL 667