Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  156 bits (394), Expect = 3e-42
 Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 333 AILAVWFGLR--RWIGRALNNITRHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVST 390
           A+L+V  GL   +W  R +  + R   Q T   L  R+      D + V A+L   I+S 
Sbjct: 180 AVLSVPLGLMGLQWQQRGIKRLLRLAEQTTSDPLIARMYT----DSRGVQARLEMSILSQ 235

Query: 391 HESL-ALVTR---NCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREI 446
              L   +TR     E L   A  S+  A  S+  L  Q      +A  +NQ+ A+ +E+
Sbjct: 236 EARLKTCLTRLQDTAEHLNDQARQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEV 295

Query: 447 AGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMV 506
           A     +   + EA   +++G  +  + ++ ++ L   +      +++L +    I  +V
Sbjct: 296 ASHVQRTADATQEANRLTSRGRDIAGETREAIERLSVVVGETGQTVTQLAKDSDEIGGVV 355

Query: 507 DMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELV 566
           D+I GIAD TNLLALNAAIEAARAGE GRGFAVVADEVR+LA  TS+ T  I  ++ +L 
Sbjct: 356 DVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQ 415

Query: 567 TAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATA 626
             A+ + Q +D   ++    +    E     + I  AVAHI     QI  ATEEQ     
Sbjct: 416 QTATNAVQTMDAGHRQAEEGVARVMEADEALVGISEAVAHITDMTTQIAAATEEQSSVAE 475

Query: 627 DVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKY 670
           ++++ ++ ISE   +T  Q  +    +E++   A  Q +++ ++
Sbjct: 476 EISRNISNISELADQTSGQAHSSALLSEELTRTANTQYSLVERF 519