Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  137 bits (344), Expect = 2e-36
 Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 21/433 (4%)

Query: 242 DYASLTAPYEMVLAGFQAQAVIEQIINKLEDAQQ-----QNKDFASAAEVAQQLVTQLNQ 296
           D A   AP E+  A    Q V +QI  +   A Q     Q+ D  + A  +  ++   N+
Sbjct: 101 DRAQGIAPVELASAKPHLQRV-DQIWQRYRPAVQALAAGQSADVKAIATDSNDILAAANE 159

Query: 297 WSTLAQQHIVQGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHL 356
             +L      +   +        TL       +L+L IL    G+  W+   ++ +   L
Sbjct: 160 VVSLISAEANRSASQQLWVALGSTLC------ILLLVILGRIAGMN-WLMLQIDELRGRL 212

Query: 357 AQLTQHKLNHRLDLVGPQDFQN-VAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSA 415
            +++Q   +  L +    D    +    N+++    E +  V +  +          G A
Sbjct: 213 EKVSQGDFSAPLQVRHADDEMGMITLAYNRLLGQVGEMIKGVRQAADDADAQCVRMAGLA 272

Query: 416 EQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQ 475
             S +++  Q   +  +A  +N++ A+  E+A  + ++   +  A + +  G  V+ ++ 
Sbjct: 273 GDSARNVEGQQAEIDQVATAMNEMLATSHEVARSTVEAANAADVAEQETNAGSTVMNESV 332

Query: 476 QRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGR 535
             ++ L   +      M +L Q    I +++++ISGIA+ TNLLALNAAIEAARAGEQGR
Sbjct: 333 GAIRTLSGHVDGLSDVMQQLVQDSHEIGKVLNVISGIAEQTNLLALNAAIEAARAGEQGR 392

Query: 536 GFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKS 595
           GFAVVADEVR LAS T      +  ++  L + A+++  A+D SR+   T L   E  + 
Sbjct: 393 GFAVVADEVRSLASRTQSSAKEVGVLVERLQSQATRAGHAMDASRQSSATTLTQIEAAQH 452

Query: 596 TFMQIERAVAHIRTRVEQITQATEEQKRATADVNKA---VAQISEQG----QETKRQLDA 648
              QI  AV  IR    QI  A EEQ +   D+N++   +AQ+++Q     Q+T    + 
Sbjct: 453 ALGQIVGAVQTIRGMTNQIATAAEEQSQVAEDMNQSLTRIAQVADQAAGVTQDTAASGNT 512

Query: 649 MLESAEQVAEIAG 661
           +++S + +  + G
Sbjct: 513 IMQSMKGLKSLTG 525