Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  148 bits (374), Expect = 6e-40
 Identities = 105/354 (29%), Positives = 176/354 (49%), Gaps = 17/354 (4%)

Query: 329 LLVLAILAVWFG-LRRWIGRALNNITRHLAQLTQHK--LNHRLDLVGP-------QDFQN 378
           LL+ AI+AV    L R I R L +    +A +   +  L   LD+ G        +DF  
Sbjct: 198 LLISAIMAVLVAILIRSIVRPLRHTMAAMANIASGEADLTRTLDVSGNDELTTLGRDFNR 257

Query: 379 VAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQ 438
              +L  V+    E+   + ++  +L Q +  +H   EQS Q +    Q    +A  IN+
Sbjct: 258 FTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAH---EQSQQQMLQMEQ----VATAINE 310

Query: 439 LDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQR 498
           +  +++E+A  +  + ++   A   + QG + IE + Q++  L  T+      +  L   
Sbjct: 311 VTYAVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADE 370

Query: 499 VTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNI 558
            T I  ++++I  IA+ TNLLALNAAIEAARAGEQGRGFAVVADEVR LA  T + T  I
Sbjct: 371 TTKIGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEI 430

Query: 559 RDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQAT 618
             M+  L   +  +   + ES +     ++ + +   +  +I +A+ ++      I  AT
Sbjct: 431 HGMIERLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQALRNLSGLNASIASAT 490

Query: 619 EEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
            +Q     D+N+ V Q +   QE+    +   E+ +Q+ E+AG    +L ++ +
Sbjct: 491 LQQSHVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFRV 544