Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  146 bits (369), Expect = 3e-39
 Identities = 97/347 (27%), Positives = 179/347 (51%), Gaps = 10/347 (2%)

Query: 312 VTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLDLV 371
           + +T+ AV L   + G LL + +  +       +GRA+++I      LT+     RL + 
Sbjct: 279 IVATVIAVVLIILLLGMLLSVLLRPL-----NLMGRAMHDIAAGEGDLTK-----RLVIE 328

Query: 372 GPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLT 431
              +F ++    N  +   H+S+  V  +   L + A     ++  S  +   Q+    +
Sbjct: 329 SQDEFGHLGNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNS 388

Query: 432 MAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAA 491
           +AA IN+L A+ +EIA  +  +   S +A   ++ G  V+ QN + +  L   ++     
Sbjct: 389 VAAAINELGAATQEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQ 448

Query: 492 MSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDT 551
           +  LN +  +I +++D+I+GI+  TNLLALNAAIEAARAGE GRGFAVVADEVR LA  T
Sbjct: 449 IETLNTKTANIGQILDVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRT 508

Query: 552 SKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRV 611
            +  + +++M+ +L + A ++   +++S++E V  +  + +  ++   +   +  I    
Sbjct: 509 QESASQVQEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMN 568

Query: 612 EQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAE 658
           + +  ATEEQ      +N  + +I+   Q+    L+A L +   + +
Sbjct: 569 QSVAAATEEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQ 615