Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  151 bits (381), Expect = 1e-40
 Identities = 105/418 (25%), Positives = 200/418 (47%), Gaps = 9/418 (2%)

Query: 258 QAQAVIEQ---IINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHIVQGKQEVTS 314
           +A A ++Q   ++  +    QQN     +  + QQ +  +     L    +V   +E  S
Sbjct: 231 EALAALQQYKSLMVSISQLMQQNDQIRDS--LRQQSMDIVTSAEKLMAGQVVSANKEKDS 288

Query: 315 TISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLDLVGPQ 374
              AVT    ++  +L+L I A    + R I R L++      ++    L + L      
Sbjct: 289 ---AVTQLLTVAVIVLLLGIFAAIL-ITRQITRPLDSTVIAARRIADGDLTNDLSTTRQD 344

Query: 375 DFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAA 434
           +   +   +  + VS    +  ++     +   AE     +EQ++  +  Q   +  +A 
Sbjct: 345 ELGLLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVAT 404

Query: 435 TINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSE 494
            +NQ+ ++++E+A  + D+   + +A++ +A G  V++   + +  L   +     AM  
Sbjct: 405 AMNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQR 464

Query: 495 LNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQ 554
           L Q    I  ++D+I  +A+ TNLLALNAAIEAARAGEQGRGFAVVADEVR LA  T   
Sbjct: 465 LIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSS 524

Query: 555 TTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQI 614
           TT I  ++  L      + + ++ SR+     +  + + + + ++I  ++  I    +QI
Sbjct: 525 TTEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQI 584

Query: 615 TQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
           + A EEQ   T ++N++V  + +   ++    +    S  ++A +  + Q M+ ++ +
Sbjct: 585 SAAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642