Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer:CHASE3 from Pseudomonas syringae pv. syringae B728a

 Score =  144 bits (364), Expect = 8e-39
 Identities = 102/380 (26%), Positives = 187/380 (49%), Gaps = 5/380 (1%)

Query: 294 LNQWSTLAQQHIVQGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNIT 353
           L + S   Q+ +VQ  Q++T       L     G  L  A+LA+   L   +GR+     
Sbjct: 165 LAEISGAEQKLLVQRSQDMTDAKHLAILILMCGG--LAAAVLAMI--LAAVLGRSTTARL 220

Query: 354 RHLAQLTQHKLNHRLD-LVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSH 412
           +          N +LD ++       +    +++     E +  +++    L    +   
Sbjct: 221 QLAIDAATAIANGKLDTVIDTSSHDELPKAFDRMQNRLREMIQQISQAANQLVVAVQQIS 280

Query: 413 GSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIE 472
           G++EQ + ++  Q+ +   MAATI +L  SI  ++  + +++  +  + + S  G +VIE
Sbjct: 281 GASEQLSGAIQEQSTSASAMAATIEELTVSIHHVSENADEAHELASRSGQQSKDGAQVIE 340

Query: 473 QNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGE 532
                +  +  T+ ++   ++ L Q    I  +V +I GIAD TNLLALNAAIEAARAGE
Sbjct: 341 NTLSSMNGIARTVQLSSTQVAGLGQHSEHISSIVSVIQGIADQTNLLALNAAIEAARAGE 400

Query: 533 QGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEE 592
           QGRGFAVVADEVR LA +T K T  I  M+ ++     ++ +++    +E+   ++ +  
Sbjct: 401 QGRGFAVVADEVRLLAQNTGKSTKEIAGMIEKIQAGVRETVESMRSGVQEVNEGVEMAGT 460

Query: 593 VKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLES 652
                ++I  +   +   V+QI+ A  EQ  A+ DV + V + ++  ++    +  +L++
Sbjct: 461 AGQAIIEIRDSSGKVLQVVDQISFALREQTAASQDVARNVERSAQMAEQNNISVQELLKT 520

Query: 653 AEQVAEIAGHQQAMLHKYEL 672
           +  +  +A   Q  + K+ L
Sbjct: 521 SGGLKNLATSLQTEVGKFRL 540