Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (389), Expect = 1e-41
 Identities = 108/363 (29%), Positives = 179/363 (49%), Gaps = 12/363 (3%)

Query: 313 TSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLDLVG 372
           +S + AV +   +   LL L I A+   L   +GRA+ +I +    LT+     RL + G
Sbjct: 273 SSAMVAVLIAVAVIALLLSLLIRALMRPLTD-MGRAMQDIAQGEGDLTR-----RLSIQG 326

Query: 373 PQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAA---QNQAL 429
             +F  +    NQ +   H S+  V+       Q  +LS      SN S+     Q+   
Sbjct: 327 KDEFAALGGSFNQFVERVHASIVEVS---SATLQVHDLSQRVVNSSNSSIVGFDEQSART 383

Query: 430 LTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVND 489
             +AA IN+L A+ +EIA  + D+   + EA   +  G  V+E+    + AL   ++ + 
Sbjct: 384 NNVAAAINELGAATQEIARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSC 443

Query: 490 AAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAS 549
             + +LN    +I  ++D+I GI+  TNLLALNAAIEAARAGE GRGFAVVADEVR LA 
Sbjct: 444 TQIEQLNASTENIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAH 503

Query: 550 DTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRT 609
            T      I  M+  L + +  +   ++ES+     +++ + +  S    + R +  I  
Sbjct: 504 RTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGDIDG 563

Query: 610 RVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHK 669
             + +  ATEEQ      +N  + QI+   Q+    L+  L+    +++ AG  + ++  
Sbjct: 564 MNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANLNETLKDCAALSQQAGRLKQLVDS 623

Query: 670 YEL 672
           +++
Sbjct: 624 FKI 626