Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (390), Expect = 1e-41
 Identities = 149/679 (21%), Positives = 297/679 (43%), Gaps = 28/679 (4%)

Query: 10  TQTLGAVFLCITILMISLSVTSLRGIERVGAQFNQLSEQALPFALNNAALTQNFLEQVKY 69
           T+ +G  F  +T+L++ L   SL     +      + E ++P       L++   EQ + 
Sbjct: 7   TRVIGG-FSFVTLLLVILGGASLVTNNNLKDSTAIMQELSMPALEATGHLSETLSEQQRL 65

Query: 70  LGYGTRSQSEQELNQVLNEWQKLDAQAGDEITRLQQNVQLLSSAEAVQ-QAEQLQREILH 128
           +     S++   +  +   + +L +   ++ T L     LL++ +  Q Q   L      
Sbjct: 66  ILKAFHSKNSSTVPGLERTFDQLSSGFNNQFTLLSG---LLNNRDNFQGQLSGLSSSYQV 122

Query: 129 FQQLAQSILKLQQLQLSKTAQISEQAKQFRYGLSSIGPEMGRIASFLAVDNP---EAMDA 185
            +  ++++LK +   LS+  ++ +  ++           +  +    +  N    E   A
Sbjct: 123 LESNSKAMLKARFDSLSQQEELLKLREKLENSADDASSNLFDLIDLESSQNQTEREIAAA 182

Query: 186 ANRFTASASAMESAFLLLFIEEEMSAAQKYRQELKNRVAGLELAFDDFKEWYPEIKD--- 242
           A     + + + +    L   EE S  +   +EL   +  ++   +        I D   
Sbjct: 183 AGAIDTTMTGIITTVYDLVAAEERSKYELISKELDYMLGEVKTKMEYISRHGEGIIDADL 242

Query: 243 YASLTAPYEMVLAGFQAQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQ 302
            ++L      VL   + +  +  + ++  D+ Q   +  +  E     VT+         
Sbjct: 243 VSTLNDDSTKVLKMLEGKDTLVTLKSRQIDSTQLTSEKLTLVEKNALTVTE-------QM 295

Query: 303 QHIVQGKQEVTSTISAVTLTQQISGTL--LVLAILAVW------FGLRRWIGRALNNITR 354
           + + +  + VT+ IS   L    S +L  L+L ++A+       F + R + R+L+ +  
Sbjct: 296 KRLAKDIETVTNDISNQALNDINSASLRTLILVVIAIVVAVVISFAVVRPLKRSLDEVNG 355

Query: 355 HLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGS 414
            L  L    L H+LD  G  +F  ++   N+++ S    +A +      L   AE +   
Sbjct: 356 ALNVLASGDLTHKLDDTGHDEFAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEETSAI 415

Query: 415 AEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVI-EQ 473
             Q+   +  Q   +  +A    +L +S  ++  +S D     ++ A+   Q ++ I ++
Sbjct: 416 TSQTTIGIQEQKSQVDQVATATTELSSSAHQV-NMSADDALSQIKQADEETQHMRTIADE 474

Query: 474 NQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQ 533
           N++ + +L   +A     +++++    SI  ++D+I GIA+ TNLLALNAAIEAARAGEQ
Sbjct: 475 NKRTILSLADEVAKASKVINKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQ 534

Query: 534 GRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEV 593
           GRGFAVVADEVR LAS T   T  I+ M+  L     ++   +   + +  + ++ +E+ 
Sbjct: 535 GRGFAVVADEVRSLASRTQDSTREIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTEQA 594

Query: 594 KSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESA 653
                 I  +V         I QA +EQ   +  V++ +  I+   +ET    +   +S+
Sbjct: 595 NQALQTISHSVHKAYDAGTHIAQAAQEQNLVSQQVSEKLEHIAAISEETALGAEQTAKSS 654

Query: 654 EQVAEIAGHQQAMLHKYEL 672
            +VA +A   Q+ + ++ +
Sbjct: 655 HEVARLAEELQSSVKEFRV 673