Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  146 bits (368), Expect = 3e-39
 Identities = 102/346 (29%), Positives = 179/346 (51%), Gaps = 3/346 (0%)

Query: 331 VLAILA--VWFGLRRWIGRALNNITRHLAQLTQHK-LNHRLDLVGPQDFQNVAAQLNQVI 387
           V+A+L   V F + R I   +NNI + ++ + + K L  R D  G  +   +    N+++
Sbjct: 276 VIAVLVAIVTFMIIRAIITPINNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEMV 335

Query: 388 VSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIA 447
            S    +  V      + ++ +    +A Q++  +  Q      +A  I ++ A+I EIA
Sbjct: 336 ESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMGATIDEIA 395

Query: 448 GVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVD 507
             +  +   +     ++  G + +EQ  +++Q+L   L  + + ++EL +   +I  ++D
Sbjct: 396 KNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLD 455

Query: 508 MISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVT 567
           +I GIA+ TNLLALNAAIEAARAGEQGRGFAVVADEVR LA  T + T  I  ++  L +
Sbjct: 456 VIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQS 515

Query: 568 AASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATAD 627
                 Q ++ S+++   + + +    +   QI + V +I     QI  A EEQ    A+
Sbjct: 516 RTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAE 575

Query: 628 VNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYELN 673
           VNK V  I +  +E+     A  ++++ V E A + Q  + ++ ++
Sbjct: 576 VNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFRVS 621