Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  159 bits (403), Expect = 2e-43
 Identities = 133/496 (26%), Positives = 233/496 (46%), Gaps = 25/496 (5%)

Query: 183 MDAANRFTASASAMESAFLLLFIEEEMSAAQKYRQELKNRVAGLELAFDDFKEWYPEIKD 242
           +DA N+  A   + E A   L IE + + A ++     ++    EL  D+ K        
Sbjct: 65  IDAINKANAGGFSAEEARNGL-IEAKKNIASRW-----DKYMSTELTADEQKL----ASQ 114

Query: 243 YASLTAPYEMVLAGFQAQAVIEQIINKLEDAQQQ-NKDFASAAEVAQQLVTQLNQWSTLA 301
              L AP     A  Q Q +I+++  K      Q + D     +V   +  ++ +  TL 
Sbjct: 115 TQQLFAP-----ANQQIQLLIDKLSGKSGSVTGQFSADIIPLYQVIDPISGKVAELVTL- 168

Query: 302 QQHIVQGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRAL----NNITRHLA 357
           Q HI   ++E   T+ + +L   I G  +   ++  +FG+  W+ R +      I + L 
Sbjct: 169 QIHIADLEREQVETLHSSSLKWFI-GLAVFAVLITSFFGV--WVNRGVMTPVTEIRQKLR 225

Query: 358 QLTQHK-LNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAE 416
           Q+ +   +     +    +  ++A  LN V+      L  +     TL  +A+  +    
Sbjct: 226 QIREKSDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTR 285

Query: 417 QSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQ 476
           Q+N  +  Q       A  +N++ A++ E+A  S+ +   +  A E +A+G  +++Q+  
Sbjct: 286 QANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSIS 345

Query: 477 RLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRG 536
            +  L + +    A + EL     +I  ++D+I  IA+ TNLLALNAAIEAARAGEQGRG
Sbjct: 346 SMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRG 405

Query: 537 FAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKST 596
           FAVVADEVR LA  TS+ T  I  M+  L      +  ++++   ++  A +S+    S 
Sbjct: 406 FAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSA 465

Query: 597 FMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQV 656
              I  +V  I      I  A +EQ      +N+++  IS+  QE+ +  + + E+  Q+
Sbjct: 466 LQDIVASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAANDLSEAVHQL 525

Query: 657 AEIAGHQQAMLHKYEL 672
           A++AGH +  +  + L
Sbjct: 526 AQLAGHMRTQVGTFIL 541