Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  142 bits (359), Expect = 3e-38
 Identities = 120/494 (24%), Positives = 230/494 (46%), Gaps = 26/494 (5%)

Query: 191 ASASAMESAFLLLFIEEEMSAAQKYRQELKNRVAGLELAFDD--FKEWYPEIKDYASLTA 248
           A +  M   F   F+ E+    Q + +  K+ +A L +      F   + +I+   S+T 
Sbjct: 16  ALSGLMVLLFGATFLFEKQKLEQAFAEYEKDTLASLAVTMAQPVFTYDFEQIEAILSVTL 75

Query: 249 PYEMVLAGFQAQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHIVQG 308
             E +       A ++   ++ +       +    A + Q+ ++  +      +  +   
Sbjct: 76  EQEQI-------AALKVFDHRGKPMASVGSNTGEDAGLEQKSISFSDNGKPTGKMEVTFT 128

Query: 309 KQEVTSTISAVTLTQQISGTL-LVLAILAVWFGLRRWIGRALNNITRHLAQLTQHK--LN 365
           +  + + +S++ L     G L L+L+++ +   L++ +   L ++   +  +      L 
Sbjct: 129 RAPIEARLSSLLLGLLAQGALILLLSMVVIVIILKKLVITPLAHVVSAMEDVASGDGDLT 188

Query: 366 HRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQ 425
            RL +    +   +A+  N  I   H ++  V      L + A      +  +N  +  Q
Sbjct: 189 RRLPVESQDEIGRLASAFNAFIEQIHATVTKVQETAAQLIEGAGTLGSLSGANNLRVQEQ 248

Query: 426 NQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRL-QALETT 484
            Q        ++QL AS  E+AG   ++   S  AAE  AQ    ++++Q+R  Q+L  T
Sbjct: 249 RQETEAAVTAVSQLSASAAEVAG---NALRTSEAAAEADAQ----VDESQRRFDQSLGLT 301

Query: 485 LAVNDA------AMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFA 538
             + D       ++ +L Q    I E+V +I+ IA+ TNLLALNAAIEAARAGEQGRGFA
Sbjct: 302 RQLVDELSRCAISVQQLQQETQKIDEVVVVINSIAEQTNLLALNAAIEAARAGEQGRGFA 361

Query: 539 VVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFM 598
           VVADEVR LAS T + T  I+ M+ ++ T  + +   +  S++    +L  +EE+KS   
Sbjct: 362 VVADEVRTLASRTQQATGEIQKMIQQVQTRVNDTVTVMGASQQLSDKSLSQAEEIKSMLA 421

Query: 599 QIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAE 658
            + R V++I     ++  A  EQ   T ++++++  ++           ++ +S E++ +
Sbjct: 422 SVTRLVSNINAMNTEVAHAASEQTSVTENISRSLNDLAGISGSASADSASLAQSGERLFQ 481

Query: 659 IAGHQQAMLHKYEL 672
                +A+++ + L
Sbjct: 482 QGERLRALVNSFRL 495