Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  143 bits (361), Expect = 2e-38
 Identities = 98/350 (28%), Positives = 180/350 (51%), Gaps = 6/350 (1%)

Query: 329 LLVLAILAVW--FGLRRWIGRALN----NITRHLAQLTQHKLNHRLDLVGPQDFQNVAAQ 382
           +L +A++A++  + L  WI  +L     ++   + +L    L+ RL+  G  DF  +A +
Sbjct: 132 MLWVALIALYPLYQLSYWISTSLGGGLWDMYIAIKRLADGDLSFRLNFFGKDDFSLIARE 191

Query: 383 LNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDAS 442
           +++   +  E +  +  N  TL   ++  +  A+Q+++    Q+Q L T+A  ++Q+ A+
Sbjct: 192 IDRNADNMSEMVKAIGNNARTLANASDEFNLQAKQNDELAQFQHQFLDTVAVAMDQMTAA 251

Query: 443 IREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSI 502
           I E++  + ++   +   A  +A   + I +  +R+  L   +    +A+ +L+   T I
Sbjct: 252 IEEVSHNAANTSDHTKHNATAAADSKQRIAEAVRRIGQLTGQIDAASSAVDQLSGNATEI 311

Query: 503 REMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMM 562
             +V  I+GI++ TNLLALNAAIEAARAGEQGRGFAVVADEVR LA  T + T  I+ M+
Sbjct: 312 GAVVTTINGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQATVEIQSMI 371

Query: 563 NELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQK 622
             L + + +      E  ++      + E V S    +  ++  +     QI  + EEQ 
Sbjct: 372 EGLQSGSGQLADITHEIVEQAELGRAAIESVGSDVDTMADSIDQVFDMSSQIAASAEEQS 431

Query: 623 RATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
            +  D+   + +I +Q Q  K   +  +  A ++ + +     +L +Y L
Sbjct: 432 VSARDIASQLNEIRDQSQTIKETAERSVVLASELQQSSTELDGILSQYRL 481