Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (336), Expect = 1e-35
 Identities = 96/333 (28%), Positives = 170/333 (51%), Gaps = 16/333 (4%)

Query: 349 LNNITRHLAQLTQHK--LNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQ 406
           ++N+ ++L  + + +  L  RLD+ G  +   +    NQ +      +  V R       
Sbjct: 229 IHNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLGRAFNQFVDKLQGIIKDVAR------A 282

Query: 407 TAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQ 466
           T E+  G+   S+Q+ AA  Q L++     +Q+  +I E++  + +    + + AE +  
Sbjct: 283 TVEVKSGADNISSQT-AAMAQQLISHNNETDQVVTAITEMSATASEVAMSTTQVAEATQA 341

Query: 467 GVKVIEQNQQ----RLQALETTLAVNDAA---MSELNQRVTSIREMVDMISGIADSTNLL 519
             + +   Q+     L  + T +A  D A   ++ LN++   I  ++ +I GIA+ TNLL
Sbjct: 342 ATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKINSVLSVIGGIAEQTNLL 401

Query: 520 ALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDES 579
           ALNAAIEAARAGEQGRGFAVVADEVR LAS T   T  I +M++EL    S +  +++ S
Sbjct: 402 ALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSELHNLVSLAVSSMESS 461

Query: 580 RKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQG 639
           ++    ++ SS  +  +   +  AV  I     QI  A  EQ   T ++N+ V  I E  
Sbjct: 462 QQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATAATEQSSVTEEINRNVFAIQEIV 521

Query: 640 QETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
            E  +  ++  ++++ +A    +   ++ ++++
Sbjct: 522 NELLQASNSASDTSQGLANEGRNLDTLVGQFKV 554