Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  141 bits (355), Expect = 9e-38
 Identities = 101/337 (29%), Positives = 178/337 (52%), Gaps = 9/337 (2%)

Query: 328 TLLVLAILAVWFGLRRWIGRALNNITRHLAQLT--QHKLNHRLDLVGPQDFQNVAAQLNQ 385
           +LL+LA++ ++  +R ++   + ++T  L  +   +  L  RL++ G  +    A   NQ
Sbjct: 195 SLLLLAVIYLF--IRHFVTIPIEHLTHGLQDIATGEGDLTRRLEVKGRDEVGLAATVFNQ 252

Query: 386 VIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIRE 445
           V+ +    +  V+++   +   A     SA Q       QN+  +T A+ + Q+ +SI  
Sbjct: 253 VMENFSTLVRQVSQSATEVSAKAHALAQSASQVADGSHQQNEKSVTAASAVEQMVSSIAA 312

Query: 446 IAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREM 505
           I+  +      S E+ + S +G K +    + +  +E T+     +++E  +   +I +M
Sbjct: 313 ISQSAEHVQQQSQESLKRSEEGNKSLGHLLEEMNNVEQTVKEMAESVNEFVRNTDAINKM 372

Query: 506 VDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNEL 565
              +  IA+ TNLLALNAAIEAARAGEQGRGFAVVADEVRKLA  +S+  + I D + E 
Sbjct: 373 TQEVKDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAEKSSRSASEI-DAITET 431

Query: 566 VTAASKS-RQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRA 624
           ++A S + R+A++E    + ++  S   V         +V  +   ++ I  AT+EQ+R 
Sbjct: 432 LSAQSVNVRRAIEEGLGHLSSSQASVTNVADILQAANGSVTEVGHGLDAIAGATDEQRRV 491

Query: 625 T---ADVNKAVAQISEQGQETKRQLDAMLESAEQVAE 658
           +   AD  +A+A ++ +  E+  Q  A  +S E +A+
Sbjct: 492 SGEVADSIEAIAAMARENNESVEQTAAAAQSLEALAD 528



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 507 DMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELV 566
           D+ +G  D T  L +    E   A      F  V +    L    S+  T +    + L 
Sbjct: 223 DIATGEGDLTRRLEVKGRDEVGLAATV---FNQVMENFSTLVRQVSQSATEVSAKAHALA 279

Query: 567 TAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATA 626
            +AS+      +  ++ VTA  + E++ S+   I ++  H++       Q+ E  KR+  
Sbjct: 280 QSASQVADGSHQQNEKSVTAASAVEQMVSSIAAISQSAEHVQQ------QSQESLKRS-- 331

Query: 627 DVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYELN 673
                        +E  + L  +LE    V +        ++++  N
Sbjct: 332 -------------EEGNKSLGHLLEEMNNVEQTVKEMAESVNEFVRN 365



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 64/327 (19%), Positives = 118/327 (36%), Gaps = 66/327 (20%)

Query: 258 QAQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHIVQGKQEVTSTIS 317
           +A A+ +      + + QQN+   +AA   +Q+V+ +   S  A +H+ Q  QE      
Sbjct: 274 KAHALAQSASQVADGSHQQNEKSVTAASAVEQMVSSIAAISQSA-EHVQQQSQE------ 326

Query: 318 AVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLDLVGPQDFQ 377
                                  L+R             ++     L H L     ++  
Sbjct: 327 ----------------------SLKR-------------SEEGNKSLGHLL-----EEMN 346

Query: 378 NVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATIN 437
           NV     Q +    ES+    RN + + +  +     AEQ+N  L A N A+   AA   
Sbjct: 347 NV----EQTVKEMAESVNEFVRNTDAINKMTQEVKDIAEQTN--LLALNAAI--EAARAG 398

Query: 438 QLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQ 497
           +       +A    D      E +  SA  +  I +     Q++    A+ +  +  L+ 
Sbjct: 399 EQGRGFAVVA----DEVRKLAEKSSRSASEIDAITETLS-AQSVNVRRAIEE-GLGHLSS 452

Query: 498 RVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTN 557
              S+  + D++     S   +       A    EQ R    VAD +  +A+   +   +
Sbjct: 453 SQASVTNVADILQAANGSVTEVGHGLDAIAGATDEQRRVSGEVADSIEAIAAMARENNES 512

Query: 558 IRDMMNELVTAASKSRQAVDESRKEMV 584
           +     E   AA++S +A+ +S +  V
Sbjct: 513 V-----EQTAAAAQSLEALADSLQNTV 534