Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  135 bits (340), Expect = 5e-36
 Identities = 92/268 (34%), Positives = 145/268 (54%), Gaps = 9/268 (3%)

Query: 402 ETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIA---GVSHDSYTDSV 458
           E L   +E      EQS++    Q + +   A  + +++A++ E+A   G + D   ++ 
Sbjct: 311 EVLSSASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATVLEVARNAGQAADIAENTR 370

Query: 459 EAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNL 518
             AE  A+ V  +      +Q+    L  +   M +L ++  +I +++++IS IAD TNL
Sbjct: 371 RKAESGAEIVGRVVTGISEVQSQSVALKHD---MEDLGRQAEAIGQIMNVISDIADQTNL 427

Query: 519 LALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDE 578
           LALNAAIEAARAGE GRGFAVVADEVRKLA  T + TT + + +  +     K+   VD 
Sbjct: 428 LALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRGVQGGTRKNMDNVDR 487

Query: 579 SRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQ 638
           S K +  A Q++        +I + V  +  +V  I  A+E+Q  A+ ++NK+V Q+S  
Sbjct: 488 SVKTIEEATQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAASEEINKSVEQVSAI 547

Query: 639 GQETKRQLDAMLESAEQVAEIAGHQQAM 666
             ET +   AM E+A  V E+A   Q +
Sbjct: 548 SAETAQ---AMREAATAVQELANQSQVL 572



 Score = 32.0 bits (71), Expect = 8e-05
 Identities = 64/329 (19%), Positives = 123/329 (37%), Gaps = 60/329 (18%)

Query: 382 QLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDA 441
           QL  +I +   ++A +  N E L Q  + S    E+     + +      +  T     A
Sbjct: 64  QLQHIIATDASAIASIESNIEKLKQQLQDSARIYEKLVSDPSERGNFEKFLDHTRQYYRA 123

Query: 442 SIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTS 501
             +   G+       +VEAA      ++     Q  + AL   + +ND   ++      S
Sbjct: 124 MDK---GMELSRVNKNVEAAALDRSEIR--GHFQAAMDALYAAVEINDKGSAQ------S 172

Query: 502 IREMVDMISGIADSTNLLALNAAIEAARAG---------EQGRGFAVVADEVRKLAS--- 549
             E  +++S     + +L L A    A AG         + G     + D  R++AS   
Sbjct: 173 AAEATNVVSSARTFSIVLVLVAIAIGAGAGVYIVRGTMAQLGEDPGYLYDVSREIASGNL 232

Query: 550 -----DTSKQT---TNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIE 601
                ++S +    + ++DM+  L    +++ +  +++R++   A Q++ E +    Q E
Sbjct: 233 DIHFRESSHRQGVYSAVQDMVTTLKAKIAEADEKSEQARRKEQEAQQATLEAEEARRQAE 292

Query: 602 RAVAH----------------------IRTRVEQITQATEEQKR-------ATADVNKAV 632
           RA A                       +  ++EQ  +  EEQ R       A  ++N  V
Sbjct: 293 RAKAEGMLQAAVKLEGVVEVLSSASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATV 352

Query: 633 AQISEQGQETKRQLDAMLESAEQVAEIAG 661
            +++    +     +     AE  AEI G
Sbjct: 353 LEVARNAGQAADIAENTRRKAESGAEIVG 381