Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  136 bits (342), Expect = 3e-36
 Identities = 98/320 (30%), Positives = 156/320 (48%), Gaps = 28/320 (8%)

Query: 349 LNNITRHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTA 408
           LN+I +    LT+     RL + G  +   +    N  +      +  V      +   A
Sbjct: 236 LNDIAKGEGDLTK-----RLAVKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAA 290

Query: 409 ELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQG- 467
              H   +  ++ L + N     +   I ++ A+  E+A       T  V  A H+A G 
Sbjct: 291 NAIHDQTKVMSRQLISHNNETDQVVTAITEMSATASEVA-----QNTTQVAEATHAATGD 345

Query: 468 ----VKVIEQNQQRLQALETTL---AVNDAAMSELNQRVTSIREMVDMISGIADSTNLLA 520
                + ++ + + + AL   +   A N  ++SE +Q++ S+   + +I GIA+ TNLLA
Sbjct: 346 VANAQRCVDASLEEISALMAQINNAASNIQSLSEQSQKINSV---LSVIGGIAEQTNLLA 402

Query: 521 LNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESR 580
           LNAAIEAARAGEQGRGFAVVADEVR LAS T   T  I +M++EL    S + + ++ES+
Sbjct: 403 LNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQ 462

Query: 581 KEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQ 640
           +  + ++ SS  +  +   +  AV  I     QI  A  EQ   T ++N+ V  I E   
Sbjct: 463 QSCIRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVN 522

Query: 641 ETKRQLDAMLESAEQVAEIA 660
           E       +L S+E+ A ++
Sbjct: 523 E-------LLHSSEEAASVS 535